KEGG   Apium graveolens (celery): 141664260
Entry
141664260         CDS       T11340                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03420  Nucleotide excision repair
agrv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    141664260
  09124 Replication and repair
   03420 Nucleotide excision repair
    141664260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:agrv04121]
    141664260
   03400 DNA repair and recombination proteins [BR:agrv03400]
    141664260
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:agrv04147]
    141664260
Ubiquitin system [BR:agrv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     141664260
DNA repair and recombination proteins [BR:agrv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      141664260
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      141664260
Exosome [BR:agrv04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   141664260
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 KCNQ_channel ORC5_lid Tuberculin
Other DBs
NCBI-GeneID: 141664260
NCBI-ProteinID: XP_074326277
LinkDB
Position
6:50999473..51008950
AA seq 815 aa
MSNPHSSSSSSTNNSSNKRSSSSSSNAAAPFFSPMKKAKSQAVAYSLDSNKNGLSQHARF
DDNDAMIDDPNPNDAVDPSPSSTNLARKKATPPQPAKKFVIKLNKAKPTIPTNFEETTWE
TLKSAITAIFLKRPDPCDLEKLYQAVNNLCLHKMGGSVYQRIEKECETHISAALQSLVRQ
SEDLVVFLSLVEKCWQDFCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKHLAL
ASEVEHKTVFGLLKMIESERRGEAVDRTLLNHLLKMFTALGIYSESFEKPFLEGTSDFYA
AEGVKYMQQADVPDYLKHVEVRLHEEHDRCVLYLDICTRKPLVATAERQLLERHISAILD
KGFTMLMDGSRIEDLQRMYMLFCRVDALESLRHALNSYIRKTGQGIVMDEEKDKDMVSCL
LEFKASLDRILEDSFSKNEAFCNTVKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTS
EEELEGMLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGS
QFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLP
HELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGRKELAVSLFQTVVLMLFND
AEKLSFQDIKDATSIEDKELRRTLQSLACGKVRVLQKLPKGREVDDNDSFSFHDQFAAPL
YRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK
FPIKPSDLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtctaacccacacagcagcagcagctcctccaccaacaactcctcgaacaagcgctct
tcatcttcttcatctaacgccgccgcgccgtttttttctccgatgaaaaaagcgaagtct
caggcggtggcttattctctcgattccaacaagaacggtctctcacaacacgctcgattt
gacgataacgacgctatgattgacgatcctaaccctaacgacgccgttgatccttctccg
tcgagtactaatttggcccggaagaaggctactccgcctcagccggcgaagaagtttgtt
attaagcttaataaagctaaaccgacgatacctacaaacttcgaggagactacatgggaa
acattgaagtcagcaattactgcaatattcttaaagcgaccagatccttgcgatttggag
aagctctatcaggctgtcaataacctttgcctgcacaaaatggggggaagtgtttatcag
cgaatcgaaaaagaatgcgagacgcacatctccgctgcattacaatcattagtaagacag
agtgaagatcttgtggttttcttgtcacttgttgagaagtgctggcaagatttctgtgat
cagatgttgatgatccgtggcatagcattgtatcttgatcgcacttatgtgaaacagact
ccaaatgtgcgttcattgtgggacatgggtttgcagctgtttcgcaaacatcttgcacta
gcttcagaagttgaacacaaaactgtatttggtctccttaaaatgattgagagtgaaaga
cgaggcgaagcagtggataggactctccttaatcatcttctaaagatgttcacagcatta
ggaatttattcggaaagctttgagaaaccatttcttgaaggcacttctgatttttatgct
gctgaaggagtgaaatacatgcaacaggcagatgttcccgactacctaaaacatgtggag
gtaaggttgcatgaggaacatgacaggtgtgtactttacttggatatttgtacaagaaag
ccccttgtagcaactgcagaacgacaacttcttgagcgtcatatttcagcaattcttgat
aaggggtttactatgctgatggatgggagtcgcattgaggacctgcaaagaatgtacatg
cttttctgcagagttgatgcccttgaatcactaaggcatgcacttaactcgtatatcaga
aagactggacaaggaattgtcatggatgaagagaaggacaaagatatggtgtcttgcctc
ttagaattcaaggcatcccttgatagaatattggaagatagcttttctaagaatgaagca
ttttgcaacacagtcaaggatgcatttgagcatctcattaatcttcgccagaaccgtcct
gctgaattaattgctaagtttttggatgagaaactccgtgccggaaataaaggtacatca
gaggaggagctggaaggaatgcttgataaagtattggtgttgttcagatttatacagggt
aaagatgtatttgaagctttttataagaaggacctagcgaaaaggcttctgttaggaaag
agtgcttcaattgacgcagaaaaatcaatgatttcaaagttgaagacagagtgtggcagt
cagtttacgaacaaacttgaagggatgtttaaggacattgaattgtcaaaggagataaat
gaatctttcaagcagtcatctcaagctaggacaaaactcccatcaggaatcgagatgagt
gttcatgttctaacaacagggtactggccaacataccctcccatggatgttcggcttcct
catgaactcaatgtctaccaggacatttttaaggaattctatttaagcaagtatagtgga
aggcgattaatgtggcaaaattcactaggtcactgtgtcttaaaagcagagttccccaaa
ggtagaaaggaactggcagtttctctatttcagactgttgtattgatgctgtttaacgat
gccgaaaagcttagctttcaagatatcaaggatgcaactagcatcgaggataaggaactt
aggaggactctacaatctcttgcctgtggtaaagtgagagtcctccaaaagcttccaaaa
gggagagaagtggatgataatgattcattttcatttcatgatcaatttgctgctcctctc
tataggataaaggtaaatgcaatccagatgaaggaaacagtggaagagaacacaagcacc
actgaaagagtgtttcaggaccgccaatatcaggttgatgctgctattgttcggataatg
aagacaagaaaagtgctgagtcatactttgcttataactgaactttttcagcagcttaaa
tttccaataaaaccatccgatctgaagaaaaggattgagagcctcattgacagagagtac
ctggagcgggacaaaagcaatcctcaaatatacaattacctggcgtga

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