Apium graveolens (celery): 141666164
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Entry
141666164 CDS
T11340
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141666164
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agrv01009
]
141666164
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141666164
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141666164
03041 Spliceosome [BR:
agrv03041
]
141666164
Enzymes [BR:
agrv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141666164
Protein phosphatases and associated proteins [BR:
agrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
141666164
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141666164
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141666164
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141666164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141666164
NCBI-ProteinID:
XP_074328259
LinkDB
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Position
6:286853865..286854877
Genome browser
AA seq
312 aa
AA seq
DB search
CISGDIHGQYSDLLRLFEYGGFPPQSNYLFLGDYMDRGKQSLERIWLLLAYKIKYSDNFF
LLRGNHECASINRIYIFYDECKRRFNVKLWKTFTDCFNCLPVAAVVDDKILCMYGGLSPD
LNNLDQIKNLPRPTAIPDTGLLCDLLWSDPSNDVKGWGLNDRGVSFTFGPDKMSEFLAKH
DLDLVCRAHQVVEYGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDGNLMCSFQVLKPT
EKKNVLQLPQLARPATIINLVYLSLLVVFALLLYIYIKGLSSRTIIRMRRDGILTIVFTH
IVPCPGVSNVNN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
tgcatttcaggtgacatccatgggcagtatagtgatttgttacgactctttgaatatggt
ggctttcctcctcaatcaaattatctgtttttaggggattatatggaccgtggaaaacaa
agtttagaaaggatatggctcttgcttgcttataaaattaagtattcggataactttttt
cttcttaggggaaaccatgaatgcgcctctatcaatagaatatatatattttatgatgaa
tgtaagcgccgattcaatgttaaactatggaaaacctttactgactgtttcaactgtctt
cctgtggctgctgttgttgatgataagatattgtgcatgtatggtggtctgtcccctgat
cttaacaatttggatcagatcaaaaacctgccacgtccaactgctatacctgacacaggt
ttgctctgtgatttactttggtcagatcccagtaatgatgtcaagggatggggattgaat
gatagaggagtatcattcacctttggccctgataagatgtcagagttcttagcgaagcat
gacttggaccttgtttgtcgtgctcatcaggttgtggagtatggttatgaattctttgct
gaaagacagcttgttaccatattttccgctcccaactattgcggtgaatttgataatgct
ggtgcaatgatgagcgttgatggaaatttgatgtgctctttccaagtactgaagccaact
gaaaaaaagaatgtattgcaactaccacaattggcaagacctgctactattattaactta
gtttatttgtcacttcttgtagtgtttgctttgcttctttatatttatataaagggtctt
tcttcaagaaccatcatccgaatgagaagagatggaattctgactattgtatttacacat
atagtcccctgtcctggtgtttcaaacgtcaacaattag
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