Apium graveolens (celery): 141666621
Help
Entry
141666621 CDS
T11340
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agrv03036
]
141666621
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
agrv00535
]
141666621
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141666621
Meiosis-specific proteins
Cohesin complex and associated proteins
141666621
Proteoglycans [BR:
agrv00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
141666621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
DUF8104
AAA_29
Motif
Other DBs
NCBI-GeneID:
141666621
NCBI-ProteinID:
XP_074328823
LinkDB
All DBs
Position
6:complement(209737318..209754172)
Genome browser
AA seq
1204 aa
AA seq
DB search
MFIKQIIIEGFKSYKEQVATEPFSSKVNCVVGANGSGKSNFFHAIRFVISDLFHNLRSED
RHAFLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRNQIIQVVQYLDERLRELDEEKAELKKYQQLDKQRKSLEYTIYDKELHDARQKVV
EIDDARNKVSEASTKMYNNVLDAHERSKELDKAFKDFTKEIQSLNKEKESVEKQRTEAIK
MHAQLELDGKDLQEKIFSNIKAKDDATKQLELLQREIQESTEELNNIKPLYNNQVMEEEG
ITREIMEREKRLSILYQKQGRATQFANKAARDKWLQKEIDEYKRALSTNVAQEKVLTDEI
KKLETDLEEKDAYISGRKTDAEALESFISQYREGFNQYKKQRDKLHDERKSLWQKENELS
AEIERLKSEVVKAEKSLDHATPGDIRRGLNSVRRICGEYRISGVFGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNAQKGGRVTFIPLNRVKAPHVVYPRSSDVIAL
LNKLKFLPKYNPAFAQVFARTVICRDLDVATKVARADGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNIIRQDTQSIGEKEQELERVKIKLQEIDQEINKHVSEQQKNDAKLAHDKS
ELEQIKQDISNAHKQKYSDSKALEKKRKVFERVLSEIDRLKASMATKKDEMGTELVDHLS
PEEKDSLSRLNPEITDLKERLISCRTNRIEIETRKSELETNLSTNLVRRKQELEAIKLSA
EPEMLHSEAELKRQELRDAKLLLDDVTQQLKRASESIEERTKKLRKIKDEKNKLKTLEDD
YQRTLQDEAKELEHLLSKRNTFFAKQEEYSKKIRELGPLSSDAFETYKRKSIKELYKLLH
KCNEQLQQFSHVNKKALDQYQNFTDQREELQKRQEELNAGDEKIKELITVLDQRKDESIE
RTFKGVAKHFREVFSELVQNGHGHLVMMKKKDADQLDDDPDEDGPRPSDMEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMVRRLADMQTTQFITTTFRQELVKVADKIYGVTHKNRVSRVNVVSREEALDFIEHDQS
HKVD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtttattaagcagattattatcgaagggttcaagagttataaagaacaagttgctact
gagcctttcagttctaaagttaattgtgttgttggtgctaatggatctgggaagtctaac
ttttttcatgcaatccgttttgtaattagcgatctcttccataacttgcgcagcgaagat
aggcacgcatttctccatgaaggtgcaggtcaccaagtgttatctgcttttgtggagatt
gtgtttgataattctgacaaccgcattccggttgacaaggaggaagtacggcttcggaga
accattggtctaaagaaggatgagtattttttggacgggaagcatatcacgaagacagaa
gttatgaatttactcgaaagtgctggtttctctcgctcaaatccgtactacgttgtgcaa
cagggaaaaattgcatcattgacgctgatgaaagattcagagcggctggatctactgaaa
gaaattggaggtactcgagtttatgaagaaaggcgacgtgagagtcttaaaattatgcaa
gaaactggtaataagaggaatcaaattattcaagttgttcaatacttggatgagagatta
agagagctggatgaagagaaggcagagctgaaaaaatatcagcagctagacaagcaaagg
aagtccttagagtatacaatatatgacaaagaactacatgatgcaaggcagaaagtagtg
gagatagatgatgctcgtaataaagtttctgaagcttcaacgaagatgtataacaatgtg
ctagatgcccacgaaaggtccaaagagttggataaagcatttaaagattttaccaaagaa
attcaaagtttaaacaaggagaaagaatctgttgagaagcagcggactgaagctataaaa
atgcatgcacaacttgagcttgatggcaaagatcttcaagaaaagatctttagtaacatt
aaagcaaaggacgatgcaacaaagcaactcgagcttctacagagggaaattcaggagtct
acagaagagcttaataatatcaagcctttgtataacaatcaagtcatggaggaggagggt
attacgagagaaattatggagcgcgaaaagcggcttagcattctatatcagaaacaagga
cgtgctacccagtttgctaataaagctgctcgtgataaatggcttcaaaaggaaattgat
gaatacaaacgggctttatctacaaatgtagcgcaggagaaagtacttacagatgaaatc
aagaagcttgaaactgatctagaagagaaggatgcctacattagtggtcggaaaactgat
gcagaagccttagaatcatttattagtcaataccgtgaaggctttaatcagtataaaaaa
cagagggataagcttcatgacgagagaaagtccttgtggcaaaaagaaaatgaactttct
gctgaaattgaaaggcttaaatcagaagttgtgaaggcagaaaaaagcctagatcatgct
actcctggtgatattagaagggggctgaattctgttcggcggatatgtggagaatatagg
atttctggagtatttggtccgattatagagttgctggattgtgacgagaagtttttcact
gccgttgaagttactgctggaaatagcttgttccacgtggtggttgaaaatgatgagata
tctacccaaataattagacatcttaatgcacaaaaaggtggacgagttacatttatacca
ttgaacagggtaaaggctcctcatgttgtttatccacggagctcagatgtgattgcactt
ttaaataagttgaaattcttacccaagtacaatcctgcatttgcccaggtatttgctaga
acagtgatttgtcgagatttggatgtggcaaccaaggttgcaagagctgatggcttggac
tgcataactttggaaggtgatcaagtgagcaagaaaggtgggatgacaggaggattttat
gaccatagacgctcaaaactgaagtttatgaacattattagacaggatacacagtctatt
ggtgagaaagaacaggagttggagagggttaaaattaagctccaagagatagatcaggaa
attaataaacatgtatctgagcagcaaaagaatgatgccaagctggctcatgataaatct
gaattggaacagattaagcaagatataagcaatgctcataagcagaagtattccgattct
aaagcgcttgagaagaagcgtaaggtttttgaaagggtattgagtgaaattgatcggctt
aaagcaagtatggctacgaaaaaagatgagatgggtacggaacttgttgatcacctgagt
ccagaggagaaagactctctgtcacgattgaaccctgaaataactgatctgaaagagagg
ctcatttcatgcaggacaaatcgtatagagattgaaacaagaaaatcagagctagagacc
aatctgtctacaaatcttgttaggcggaagcaagaacttgaggcaataaagttatctgca
gagcctgaaatgctacacagtgaagctgaacttaagaggcaagaactaagggatgccaag
ttgttactggatgacgtgacacaacagctaaaaagagcttctgaaagcatagaagaacgc
acgaaaaaacttagaaagattaaggacgaaaaaaacaagctaaagaccttggaggatgac
tatcagaggacccttcaggatgaagcaaaggagctggaacatctattaagtaaaaggaac
actttttttgcgaaacaagaagagtactcgaagaaaatcagggaactgggtcctctatct
tcagatgcttttgaaacgtataaaaggaaaagcataaaagagttatataaattgcttcac
aagtgtaatgagcagctgcagcaattcagccatgtcaacaagaaagcacttgatcaatat
caaaattttacagatcaaagggaagagctacagaaaagacaagaagaattgaatgctggt
gatgagaaaatcaaggaactaataactgtgctggatcagaggaaggatgaatcgatagaa
cgtacatttaaaggtgttgctaagcattttcgtgaagtattctctgaactcgtccaaaat
ggccatggtcatttggttatgatgaagaaaaaggatgctgatcaacttgatgatgatcct
gatgaagatgggcctcgtccaagtgatatggaaggaagggttgagaaatacattggtgtg
aaagtaaaggtttcttttaccgggcaaggagagacacagtctatgaagcagctctctggc
ggtcagaaaaccgtggttgcactgacactgatttttgctatacagagatgtgatcctgct
ccattttatctatttgatgagatagatgctgcgttagatccgcagtacagaactgctgtt
ggaaatatggtgcgtcgtttggcagacatgcaaaccacacagtttataacaactactttc
cggcaagagcttgtgaaagtcgctgacaagatatatggggtgacacataaaaatcgggtt
agccgcgtcaatgttgtctcacgggaagaagcattggactttattgagcatgatcagtct
cacaaggttgattga
DBGET
integrated database retrieval system
