Apium graveolens (celery): 141666720
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Entry
141666720 CDS
T11340
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141666720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141666720
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141666720
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141666720
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141666720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141666720
NCBI-ProteinID:
XP_074328984
LinkDB
All DBs
Position
6:52988565..52997040
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AA seq
696 aa
AA seq
DB search
MDDADGGLSFDFEGGLDSGPTQPTASVPVIHQPDPNSIAVASVANNTSNFVPPPDVSDHP
APGNFSGRRSYRQTVCRHWLRSLCMKGEACGFLHQYDKARMPICRFFRLYGECREQDCVY
KHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTSYSYNNSSRFY
QNRNHNYTQHAERPHVPPGTNGVHQVIKSTPAESPNVQQQQQQQPIQQTQQPVVQAQAQN
LPNGQQSQASRSAIPLPQGISRYFIVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDSV
ENVILIFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFH
KTRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMEISLAAELKREEEKA
KGVDPEDGTENQDIVPFEDNEEEEEEESDEDDQSFSQGMAMVAQGRGRGRGMMWPPHMPL
GRGARPMPGMRGFPPVMMGPDGFPYGPLGPDGFPVPDLFNMGPRGFGPYGPRFSGDFAGP
GGMMFQGRPFQPGNFPGGGFGMMGPGRAPFMGGGSAGRPGGLHPMYPPHQSQPPQTSNKG
KRDQKATVNDRSDRYSAGSDQGKGVEMVGSGGGLDDEVQYQQKINQQEDQIGVGNNFKND
ESASEDEAPRRSRHGEGRKKRRSSERDEATGSENQE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgccgatggaggcctaagcttcgatttcgaaggcggcctcgactccggcccg
acccaacccaccgcatccgtacccgtgatccaccaacccgacccgaattcaatcgccgtc
gcctccgtcgctaacaacacatccaatttcgtccctccgccggatgtttccgatcatccg
gcgccgggaaacttctccggccggcggagttaccggcagacggtgtgtcggcactggctt
cggagtctgtgtatgaaaggagaggcctgtgggttcttgcaccagtatgataaggctagg
atgccgatttgtcggttttttcgactttacggagagtgtcgagagcaggattgtgtgtat
aagcacaccaatgaagatattaaagagtgtaatatgtataagttgggattttgtccaaat
ggtcctgattgccggtataggcatgcaaagctccctggacccccgccaccggtggaagaa
gtacttcaaaaaatacaacagctgacatcatacagttacaataactcaagtaggttctat
caaaaccgtaaccataattatactcaacacgcagaaagacctcatgttccaccgggtact
aatggtgtccatcaagtaataaaatcaacaccggcggaatcacctaatgttcagcagcaa
cagcaacaacaaccaatccagcaaacacaacaaccagttgtgcaggcccaagctcaaaat
cttcctaatggccagcaaagtcaagctagtagatccgcgataccccttcctcaaggaata
tctaggtattttattgtcaaaagttgcaaccgggagaattttgaattgtcggtacaacaa
ggagtttgggctacgcaaaggagcaatgaagctaaacttaatgaagcctttgactcagtt
gaaaatgtgattttaatattttcggtgaacaggacccgaaattttcagggctgtgcaaaa
atgacatctaaaatcggtgggtctgttggaggtggaaattggaagtatgctcatggaaca
gcccattatggaaggaatttctcggtcaaatggttaaagctttgtgaactatccttccac
aaaacacgccatttgaggaatccatacaatgagaacttgccggtcaagatcagcagagac
tgccaggagctggagccctcagttggtgagcagttggcatcgttgctatatcttgagcca
gacagtgaactgatggaaatttcacttgcagcggaattaaagcgcgaggaggagaaggca
aagggagttgatcctgaggacggaactgaaaatcaagatattgttccatttgaggacaat
gaagaggaggaagaggaagaaagtgatgaagacgatcagagttttagccaaggtatggcg
atggtagctcaaggcagaggtaggggcaggggaatgatgtggcctcctcacatgcctcta
ggacgaggtgccaggccaatgcctggaatgcgtggttttccacccgtcatgatggggccc
gatggctttccttatggcccattaggacctgatggttttcctgtgccagatctttttaat
atgggacctcgtggttttggtccatatggccctagattttctggtgattttgctggccct
ggaggcatgatgtttcaaggtcgaccttttcagcctggaaactttccaggtggtggattt
gggatgatgggccccggaagagctcctttcatgggcggtggatccgcaggtcgtcctggt
ggcttgcacccaatgtatcctccacatcaatcacagccccctcagacctcaaacaagggt
aagagggatcagaaggcaacagtaaatgataggagcgacagatatagtgctggttctgat
caaggcaagggggtagaaatggtaggctcaggtggtggactggatgatgaggtccagtat
cagcaaaaaataaatcaacaagaagatcaaattggtgttggaaataacttcaaaaatgat
gaaagtgctagtgaggatgaagcaccaaggaggtcgagacatggggaaggaaggaaaaag
agacgaagttctgagcgagatgaagccacaggttcggaaaaccaggaataa
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integrated database retrieval system
