KEGG   Apium graveolens (celery): 141666891
Entry
141666891         CDS       T11340                                 
Name
(RefSeq) transcription factor bHLH140
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141666891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agrv03400]
    141666891
Enzymes [BR:agrv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     141666891
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     141666891
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     141666891
DNA repair and recombination proteins [BR:agrv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     141666891
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     141666891
SSDB
Motif
Pfam: DcpS_C AAA_33 zf-C2HE Macro HIT AAA_18 CPT AAA G-alpha Viral_helicase1 AAA_16 AAA_17 ATP_bind_1 AAA_25 MCM AAA_5 AAA_29 AAA_22 nSTAND3 Zeta_toxin NACHT nSTAND_NTPase5
Other DBs
NCBI-GeneID: 141666891
NCBI-ProteinID: XP_074329237
LinkDB
Position
6:complement(141754358..141758836)
AA seq 822 aa
MDIDTQITTKGKEEQIEEKKGIMVILVGAPGSGKSTFCQDVMKISNRPWFRVCQDAIGNG
KAGTKVQCLASAATALKEGKAVFIDRCNLEKEQRADFLKLGRSHGNVHAVVLDLPAKLCI
SRCAKRTGHEGNLQGGKAAMVVNRMLQKKELPKLIEGFSRITHCQNETEVQAAVSTYGSL
GLLDSLPSGVFGQKNSESKVQLGIMKFLKKVDGPRNAANNSQVSVGNNKLHNENEIALHG
PESGVASSGNVGSEVKDCEHTLSGNVGNEVTDSEYNLSINVGNEVKSSEHSLPGNVSDGV
KDHECTLSCNVGKEVKDCEDINMVSHKDTVSSDNVPTLAFPSISTADFKFNLEKASDIIV
DQVELFLQKYHNVRLVLVDLSHSSKILSLVSSKASQKKIDTRKFFTFVGDITRLYSQGGL
RCNVIANAANWRLRPGGGGVNAAIYSAAGKSLETATKIRAGSLMPGKALVVPLPSTSPLC
SSEGITHVIHVLGPNMNPMRPNCLGNDYTKGCRVLREAYSSLFEGFGSILGEQNKLINES
NEKEVSETKDQGELNLMKQFALTDQKGKRECVNEIEINKKCKVPQNENESDSTDLLNKNE
DRSTKKRDESMSKAWGAWAQSLYNIAMHPEKHKNDVIDILDDVVVLHDLYPKAEKHLLVV
ARAAGLDQLADVRSQHLPLLRTMHNVGLKWAEKFLTENDSLIFRLGYHSAPSMRQLHLHV
ISQDFDSKHLKNKKHWHSFTSPFFLDSVDVIEEVSKQGKATLNNDERYLTKELRCHRCRS
AHPNIPRLKSHISNCQSPFPAALLQNGRLILPPSTQSAEKPS
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggacattgatactcaaattacaactaaaggaaaagaagaacaaatagaagaaaagaag
ggcattatggtgatcctagtgggtgctcctggtagtggcaagtctactttctgccaagat
gttatgaaaatctcgaaccggccctggtttcgtgtctgccaggacgcaattggtaacggt
aaagctggaaccaaggtgcaatgtctagctagtgcagccactgcgttgaaggaggggaaa
gctgtttttattgatagatgcaacctagaaaaagaacagcgtgcagactttttgaaactt
ggtcgttcccatggtaatgttcatgctgtggtgctggatcttcctgccaagctttgtata
tctcggtgtgcaaaacgtacaggacatgaaggaaacttacaaggcggaaaagctgcaatg
gttgtgaatcggatgctgcaaaagaaagaactacctaaattaattgaaggattcagtagg
attacacattgccagaatgaaactgaagttcaagctgccgtcagtacatatggttcactt
ggtctattagatagccttccatctggcgtttttggtcaaaagaattctgaatcgaaagtt
cagcttggtattatgaagttcttgaagaaagtagatggaccccgtaatgcagctaacaac
tctcaggtttctgttggtaataataaacttcataacgagaatgaaatagccttacatgga
ccagaaagtggtgttgcttcatctggtaatgttggcagtgaggtgaaagattgtgaacac
actttatctggtaatgttggtaatgaggtgacagattctgaatacaatttgtctattaat
gttggtaatgaggtaaagagttctgaacactctctgcccggtaatgttagtgatggggtg
aaggatcatgaatgcactttatcttgtaatgttggcaaggaggtgaaggattgtgaagac
attaatatggtctctcacaaagatactgtttcttcagataatgttcccactttggctttt
ccatctatttcaacagctgatttcaagtttaatcttgaaaaagcttccgatatcattgtt
gaccaagttgagctgttcttacaaaagtatcacaatgttaggctcgtcttagttgatttg
tcgcacagttcaaagatattgtccttggtcagcagcaaggcatcacaaaaaaagattgac
acccgtaaatttttcacgtttgtcggagatataactcgcctgtattcccaaggaggtcta
cgctgtaacgtgattgcgaatgctgctaactggcgactaagacctggaggtggaggtgtt
aatgctgctatctatagtgctgcaggaaaatctctagaaacagcaacgaagatacgagct
ggatccctgatgcctggaaaagccttagttgtccctctcccgtcaacttctcccttgtgt
agcagcgaagggataacccatgtcatacatgttcttggacccaatatgaaccccatgaga
ccaaattgtcttggcaatgactatactaagggctgcagagttctacgtgaggcgtactcc
tcacttttcgaaggctttggatctatactaggagagcaaaataagttgattaatgaaagt
aatgagaaagaggtttcagagaccaaagatcagggtgaattgaaccttatgaagcagttt
gcacttactgatcaaaaaggcaaaagagagtgtgttaatgaaattgaaattaataaaaag
tgtaaggtacctcagaatgaaaatgaatctgatagtacagatctgttgaataaaaatgaa
gaccgaagcaccaaaaagagagatgagagtatgtcaaaggcttggggtgcatgggctcaa
tctttatataacattgccatgcatcctgagaagcataagaatgatgtgatagacatattg
gatgacgttgtggttcttcatgatctatacccgaaggcggagaagcatttgctggtagtg
gcaagagctgcaggacttgaccagcttgcagatgttcgctcacaacatctcccgttacta
aggacaatgcataatgtgggtttaaaatgggctgagaagtttttaaccgaaaacgattca
ttgatctttcgtcttggatatcactcagcaccttccatgcgacagctgcatcttcatgtc
attagtcaggattttgattccaaacacttgaagaacaagaaacactggcactcctttact
tctccctttttcctcgactctgtggatgtaatagaggaagttagtaaacaggggaaagca
acactgaacaatgatgaaagatacttgacaaaggagttgcgatgccacagatgtagaagt
gcacatccaaacattcctcgcctgaaatcacatattagcaattgccaatccccctttcct
gctgctctacttcaaaatggccgtcttatccttccacccagcacacaaagtgctgaaaag
ccttcttaa

DBGET integrated database retrieval system