Apium graveolens (celery): 141666982
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Entry
141666982 CDS
T11340
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00900
Terpenoid backbone biosynthesis
agrv01100
Metabolic pathways
agrv01110
Biosynthesis of secondary metabolites
Module
agrv_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141666982
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
agrv01006
]
141666982
Enzymes [BR:
agrv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
141666982
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
141666982
2.5.1.29 geranylgeranyl diphosphate synthase
141666982
Prenyltransferases [BR:
agrv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
141666982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Csa_translocation_dom
Motif
Other DBs
NCBI-GeneID:
141666982
NCBI-ProteinID:
XP_074329353
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All DBs
Position
6:complement(245485324..245488004)
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AA seq
341 aa
AA seq
DB search
MSALTSILSSSSYSPFHHLPCKNTNTFLRKPRTTINQCSATSFSSISTNHFDLKSYWSTL
IAEIDEKLDEAIQVQYPNQIYEAMRYSVLAQGAKRAPPVMCVAACELLGGDRRAAFPTAC
ALEMVHAASLIHDDLPCMDDDPSRRGRPSNHTMYGTDMAILAGDALFPLGFQHIVSHTPS
GLVPEDRLLRVIAEIARAVGSTGMAAGQFLDLEGGPNSVEFVLEKKYGEMGECSAVCGGL
IAGATDDEIERLRKYGRAVGVLYQVVDDVLEEKMRSQEEKGKKGGKSYVRVYGVEKAMEV
AEDLRGRAKRELDSFENYGERLLPLYSFVDYAADRSFSLGV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttgacatcaattctatcttcctcttcttattctccatttcatcatctccca
tgtaaaaacacaaacacttttttaagaaaaccaagaacaacaatcaaccagtgttctgca
acatcattctcatcaatctcaacgaaccatttcgatttgaagagttattggagtaccctt
atagctgaaattgatgagaagcttgatgaagctatacaagtacaatatcctaatcagatc
tatgaggctatgagatactctgttcttgctcagggtgctaaacgagctcctcctgttatg
tgtgttgctgcttgtgagcttttaggcggtgaccgtcgtgctgcttttcccactgcttgt
gctcttgaaatggttcatgctgcttcattgatacatgatgacttgccatgcatggatgat
gatccatcccgtcgaggacgaccctcaaaccacaccatgtatggcaccgatatggcaatt
cttgctggtgatgccttatttcctttaggcttccaacacattgtttcccatacaccttca
ggccttgtcccagaggaccgcctccttagagttatagctgagatagccagagcagttggt
tccacaggcatggcagcaggtcagtttcttgacctagaaggtggaccaaattcagtagag
tttgtcctagaaaaaaagtatggtgaaatgggcgagtgctctgctgtatgcggaggtcta
atagcaggagctacggatgatgagatcgagagattgagaaagtatggtagggctgttgga
gtattatatcaggttgttgatgatgtgttggaagagaaaatgaggagtcaagaggagaag
gggaaaaaaggaggtaaaagttacgtgagggtttatggcgtagagaaggcaatggaagtg
gcggaggatcttaggggtagagcaaagagggagttggatagttttgagaattatggggag
agattgctacctctttacagcttcgtagattatgcagcagatagaagttttagtttaggt
gtttaa
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