KEGG   Apium graveolens (celery): 141667032
Entry
141667032         CDS       T11340                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    141667032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agrv03021]
    141667032
Enzymes [BR:agrv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     141667032
Transcription machinery [BR:agrv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     141667032
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 141667032
NCBI-ProteinID: XP_074329434
LinkDB
Position
6:complement(248009530..248020100)
AA seq 1178 aa
MGRSCYMDIDIDDLFEDDLGDLGEPFLNSVCKKAATSFFEQHGLISHQLNSYNDFIKHGI
QNVFDSIGEITVQPGYDPSKKGDGDWRYASVKFGKVKLARPTFFTGEKFFNDNAIDFVDF
YPRHARLQNMTYSSKMKVEVHLQVYTQKMVRSDKFKTGKEQYVDKAVCKEIREEIPIGTL
PVMVKSDLCWMKNAKQDDCDFDHGGYFIIKGAEKTFVAQEQICLKRLWLTSSPSWTASYR
HAFKRKRVHVKLLDPKSDDIGGGEKILTVYFLGMEVPIWILFFALGVSSDKEVVDLIDVD
LEDGRIVNIMIASIHHADKECDEECGVKFRRRGMALKYIEKKLKSCPFPPAESVEECINK
YLFSGLTGFKQKAHVLTYMTKCLLQGYTGRRKVDNRDDFRNKRLELAGELLERELKVHLK
HAEKRMVKAMQRDLYKDKVEFIERYLDSSIITNGLSRAFSTGNWSHPYIRGERTSGVVAN
LGRTNPLQMIAEMRRTRQHVDYTGRVGDARYPHPSHWGKLCFLSTPDGENCGLIKNLAST
GLVSTTVYEPIVEKLLDCGMEELVDDTSSSLNDKDNIFLDGELVGLCRDPASFVAELRNM
RRSKELPHQVEIKRDEKNREVRIFCDAGRILRPLLVVHNLKKIKLLKGGDYSFQTLLDAG
VIELIGTEEEEDCSTAWGIKYLMMQTSGDPPKKYTHCELDMSFLLGLSAGLTPFCNHDHA
RRALYQSQKHSHQAIGFSTTNSSIRVDTNTNQLYYPQKPLFRTMLSECLGKAENRMLPKP
EFYNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHIRSYKADVNNTEATLKKQKL
EDAINFGKIPSKIGRVDSLDEDGFPFIGANLQTGDIVIGKHAESGVDQSIKLKHTEKGMV
QKVILSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPD
IVINPHAFPSRQTPGQLLEAALGKGIALGGKERYATPFSTLSVDAITNQLHRAGFSRWGN
ERVYNGRTGEMIRSLVFMGPTCYQRLIHMAEDKVKFRNTGPIHPLTRQPVADRKRFGGIK
FGEMERDCLIAHGASANLHERLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCR
YCQSSEDIVKVSVPYGAKLLSQELFSMGISLKFETQLC
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgggccgttcttgttacatggatatagacatagacgacctctttgaggatgatttaggg
gatctaggagaaccgtttctaaacagtgtttgtaaaaaagcagcaacatcatttttcgaa
caacacgggctgatcagtcaccagctgaactcatacaatgattttattaaacatggtatt
cagaatgtctttgattccattggcgagatcaccgtccagcctggttatgatccatctaaa
aagggtgatggtgactggaggtatgcttcggtgaagtttggaaaggtcaagcttgcgcgg
ccaacattcttcactggtgagaagtttttcaatgataatgctatagatttcgttgacttc
tatcccagacatgctcgccttcagaatatgacttactcttcaaagatgaaagttgaggtt
catcttcaggtatatacgcagaagatggttaggagtgacaagtttaaaactggcaaagaa
cagtatgtagacaaggctgtttgtaaggaaattcgggaggagattcctattggaacgctt
ccggtgatggtgaaatctgatttatgctggatgaaaaatgcgaagcaagatgattgtgat
tttgatcacggtggctatttcataataaaaggagctgagaagacctttgttgctcaagaa
cagatttgcttgaagaggctttggttgactagtagtccctcttggactgcttcataccgt
catgcttttaaaagaaaaagagtccatgtaaaacttctagaccctaaaagtgacgacatt
ggaggtggcgaaaaaattcttactgtgtattttttggggatggaagttccgatatggata
ttattttttgctcttggagtatcgtctgataaagaggttgttgatttgattgatgttgat
cttgaagatggcaggattgtgaatattatgattgcatcaattcaccatgctgacaaagag
tgtgatgaggagtgtggtgtgaagttccgtagaagaggaatggctcttaaatacatagaa
aagaaacttaaaagttgcccattcccccctgcagaatctgtcgaagagtgcattaacaaa
tatctcttctccggtctcactgggttcaagcagaaggctcatgttcttacctatatgact
aagtgcctcttgcagggttatactggtcgtagaaaagttgataatagggatgatttcaga
aacaagaggttagagctggctggtgagttacttgagcgcgagcttaaggttcatcttaag
catgctgagaaacgcatggtcaaggctatgcagagagatctttacaaggataaagtggag
tttattgaacgctatctggattcatcaattattacgaatggactttcaagggcattttcc
acagggaattggtctcatccatacatcagaggggaaaggacctccggtgtagtggcaaat
cttggtcgaacaaatccattgcagatgatagctgaaatgaggagaacacgtcagcatgtt
gattacacagggagagttggtgacgctagatacccgcacccttctcactgggggaaattg
tgttttctttctactcccgatggagaaaattgtggcctcataaaaaatcttgctagcact
gggcttgtcagtaccactgtatatgagccgattgttgaaaaattacttgattgtggcatg
gaagaattggtagatgatacttcatcttctcttaatgataaggacaatatatttctggat
ggggaactggttggattgtgtagagatcctgcatcatttgtcgcagaattaagaaatatg
cgacgctcaaaagaacttccccaccaggtggagattaaaagagatgagaaaaatagagaa
gtacgcatattttgtgatgctgggaggattttacggcctcttttggtcgtccataatttg
aaaaaaattaaattactcaaagggggagattactctttccagacacttttggatgcagga
gtgattgagctgattggaactgaagaggaggaagactgttccacagcatggggcattaaa
tatctcatgatgcaaactagcggagatccacccaagaaatacacacactgtgaacttgac
atgtcatttctcttgggtttaagcgccggactgacacccttttgtaatcatgatcatgca
agaagggccctctaccaatcacaaaagcactcacatcaagccattggtttttctaccacc
aattcaagtatcagagtagacacaaatacaaatcagttatattatcctcaaaaaccactt
tttcggacgatgctttcagaatgtcttggaaaagcagaaaacaggatgcttcccaagcct
gaattttacaatgggcagtgtgctattgtagctgtaaatgttcaccttggttacaaccag
gaagattccttggttatgaatcgctcttcactagagcggggcatgtttcgatctgagcac
attcgaagttacaaagctgatgttaataacacagaagctactttaaagaagcaaaaatta
gaggatgcaataaacttcggaaagatcccaagtaaaattggtcgagttgacagcttagat
gaggacggttttccgtttattggtgcaaacctgcagactggtgatatcgtcattggaaaa
catgcagaatcaggggttgatcagagtattaaactgaagcatactgaaaagggaatggtt
cagaaagtaatactttcttcgaatgatgaagggaaaaactttgctgtagtatctctgaga
caggttcgatccccatgtctcggagacaagttttctagcatgcatgggcaaaagggtgtt
ctaggttttctggaatctcaggagaacttccctttcactgctcaaggaatagttccggat
attgtcataaatccacatgcatttccttcacgccaaactcctggccagcttctggaggct
gctctgggaaaagggattgcccttgggggtaaagaaagatacgccacccctttctccact
ttgtcagttgacgccataacaaatcaacttcacagggctggtttttctagatggggaaac
gaaagagtttacaatggtcgaaccggtgaaatgattcgttccctggtatttatgggccca
acctgctaccagcgcttgatccatatggctgaagacaaggtgaagttcaggaacacgggg
cctattcatcctctcactagacaaccagttgctgacaggaagcgttttggaggaatcaag
tttggggagatggagcgcgattgcctgatagctcatggagcctcagctaatttgcacgaa
cgtctcttcacactcagtgactgctcacagatgcatatctgtcgtaaatgcaagcacccc
gcaaatgtgatccaaaggacggtaatgggtgggcgcaagattcgtggcccttactgccgt
tattgccagtcttctgaagacattgtcaaagtgagtgtgccttatggggcgaagctactt
tcccaggagcttttcagcatgggcatatctttgaagttcgaaactcaattatgttaa

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