Apium graveolens (celery): 141667436
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Entry
141667436 CDS
T11340
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
agrv Apium graveolens (celery)
Pathway
agrv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141667436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agrv04131
]
141667436
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrv04147
]
141667436
Membrane trafficking [BR:
agrv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
141667436
Exosome [BR:
agrv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141667436
Exosomal proteins of colorectal cancer cells
141667436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
GRAM
HTH_10
Motif
Other DBs
NCBI-GeneID:
141667436
NCBI-ProteinID:
XP_074330034
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Position
6:225910243..225915542
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AA seq
441 aa
AA seq
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MSKMWLPAAELTSSRRPVLIPGEVESCLLSSVDIVCEENPNLPPYKSGLLTLTTHRILFI
PETSSTAVAIPLAAITHIFSSKKSIKSMFASPRVRFQVTTTGEGSVDKNGSRSAVVTLVC
RGKSGPDPDVVVGKLWEAWRGRAWEASSGGTGSSQVVTVEDGGSGVGGFKMPVVGVSGIL
RKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSASQSSASTDEELGT
TKEEMQDWLLSVGIASPVTKEAAGALYHQQLSRQLADFVKIPIERAGGMINLIDVYCLFN
RARGTELISPDDLLQACTLWEKFDVPVMLRKFDSGVMVIQNKSHTDEEVFARIKSLVLKP
EALRIGVSASDAAMTLGIAPAMAKEHLLSAESKGLLCRDVSPDGFRFYISLFEEFNGDDM
YIVKEYGNYAAWVASNTISSR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatgtggctccctgctgcggaacttactagtagtcgtaggcctgttcttatt
cccggtgaagtcgaatcatgtttactctcctccgtcgatatagtttgtgaagaaaacccc
aatttgcctccctacaagtctggactactcacccttactacccaccggattctttttatt
cccgagacatcttcgactgcagtggctataccacttgcagctataacccacattttctcg
tccaagaagtcgatcaagtcaatgtttgctagtcctagggtacggttccaggttacgacg
actggtgaaggaagtgttgataagaatgggagtaggtctgcggtggtgacgcttgtgtgc
aggggtaagtcgggtcctgacccggatgtggttgtgggaaagctttgggaagcatggaga
gggagagcgtgggaggcgtcaagtggtggaacggggtcgagtcaggttgtgacggttgaa
gatggtgggtcgggggtcggaggttttaaaatgccggtggttggggtttcgggaatattg
aggaaagaacaggagatgtgggagagtactgataagagtttgcaagatgcttttcaggac
ctgaatgcccttatgagtaaggctaaagagatggtgatgttagcagagaaaatgaggcaa
aaactcctttcaggttcagccagtcaatcaagtgcatcaactgatgaggagttaggtacc
accaaagaggaaatgcaagactggttgctgagtgttggtattgcctcccctgtaactaaa
gaagctgccggtgcattgtatcaccagcagttgtctagacagctggctgatttcgtgaaa
attccgatagagagagctggaggaatgatcaatttaatagatgtttattgtctctttaat
cgtgctagaggcacagaattaatatcaccagatgacttgctccaggcatgtacactgtgg
gagaagtttgatgttccagttatgcttcggaagtttgatagtggtgtcatggtcatacag
aataaatctcacactgacgaggaggtttttgctaggataaagtcacttgtactgaagcca
gaagccctccggattggggtcagtgctagtgatgctgcaatgactctgggtattgctcca
gctatggcaaaggagcatcttctttctgctgaaagcaaaggtttactatgcagggatgtt
agccctgatggcttccgcttttatatcagtctatttgaagaattcaatggtgatgatatg
tacatagtgaaagaatatgggaactatgctgcgtgggttgcttctaataccatttcttcc
aggtga
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