Apium graveolens (celery): 141667818
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Entry
141667818 CDS
T11340
Name
(RefSeq) putative pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141667818
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141667818
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141667818
NCBI-ProteinID:
XP_074330547
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Position
6:complement(2120033..2122502)
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AA seq
404 aa
AA seq
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MAMATTNILLFFSLLFVQILISSSSHQDPDLVVHEVNRNINDSRRNLGFLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKNAVGGKDGKIYVVTDSGDDDPVTPKPGTLRHAVIQD
EPLWIIFQRDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDC
KQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCEDGLIDAIMGSTAITI
SNNFMTHHDKVMLLGHSDSYSQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLNGAF
FKPSGAGASSSYSRASSLGARPSTLVGQLTGASGSLNCKKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcaaccactaacattctccttttcttctctctcctctttgttcaaattctc
atttcctcctcctcacatcaagaccctgatttagtagtacatgaagtaaataggaatatt
aacgattctaggaggaacttgggatttttgtcttgcgggacaggtaatcccatagacgac
tgctggcggtgcgaccctaattgggagaagaaccgccagcgtctagcggattgcgcgatt
ggattcgggaaaaatgccgttggaggaaaagacggtaaaatttacgtcgtcaccgactcc
ggtgacgacgatccggttacacctaagccgggaaccctgaggcatgcggtgattcaagat
gagccattatggatcatcttccaacgtgacatggttataaaattaaaagaagaattaatt
atgaattctttcaaaacaatcgatggcaggggagctagtgtacacattgctggtggtcca
tgcataactatccaatacgtgacaaatattattattcacggaatcaatattcacgactgt
aagcaaggcggaaacgctatggtgcggagctccccacggcatttcgggtggaggacgata
tcggacggtgatggcgtgtcgatattcgggggaagccacgtgtgggttgatcattgctcg
ttgtcgaattgcgaagatgggctgattgatgctataatgggatcaacggctattacaatt
tcgaacaattttatgactcatcatgataaggtgatgttgttagggcatagtgattcttat
agtcaagataagaacatgcaagttacaattgcttttaatcactttggagaagggcttgta
caaagaatgcctagatgtagacatgggtatttccatgtggtgaacaatgactacacccat
tgggaaatgtatgcaattggaggtagtgcttcacctactattaacagtcaaggcaataga
tttcttgcacctgaccgaagatttagcaaagaggtgacgaagcacgaggatgcacctgag
agtgaatggaagaactggaactggagatcagaaggggatttgatgttgaatggtgcattt
tttaagccatcaggagccggagcttcttcgagttactcgagagcttcaagcttaggagca
aggccatcaactctagttggtcagcttacaggtgcttcaggttcacttaactgcaagaag
ggttcaagatgctag
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