KEGG   Apium graveolens (celery): 141667954
Entry
141667954         CDS       T11340                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03013  Nucleocytoplasmic transport
agrv03015  mRNA surveillance pathway
agrv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141667954
  09122 Translation
   03013 Nucleocytoplasmic transport
    141667954
   03015 mRNA surveillance pathway
    141667954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agrv03019]
    141667954
   03041 Spliceosome [BR:agrv03041]
    141667954
Messenger RNA biogenesis [BR:agrv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     141667954
    TREX complex
     141667954
Spliceosome [BR:agrv03041]
 Complex C
  Other components
   EJC/TREX
    141667954
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    141667954
SSDB
Motif
Pfam: RRM_1 FoP_duplication YHR127W_C RRM_3 RRM_10
Other DBs
NCBI-GeneID: 141667954
NCBI-ProteinID: XP_074330708
LinkDB
Position
1
AA seq 243 aa
MSALDQTLDDIIKSNKKSGGGGGRGRGWSFGPGPARRSNNRSSNRAAPYSSSKAPNSAWK
HDMFGSDQAVANQGYGGGNRGSSIETGTKLYISNLDYGVSQEDIKELFSEIGDLKRCVVH
YDRSGRSKGTAEVVFSRRQDALSAVTKYNNVQLDGKPMKVEIVGTNIVTPGAGPPTANGN
GSNFNGVPRSGQGRGGFGRSRGGSRGRGFGRGRGSGRGRGEKLSQDDLDADLEKYHAESM
QIN
NT seq 732 nt   +upstreamnt  +downstreamnt
atgtctgctctagaccaaactctcgacgacatcattaaaagcaacaagaagtccggcggc
ggcggcggtcggggcagaggctggtcttttggtcccggtccagctcgccggtccaataat
cgctcttccaatcgagctgctccttactcctcttctaaggcaccaaattcggcgtggaag
catgacatgtttggttcggatcaggcggtggcgaatcagggatatggaggtgggaaccga
gggtcgtctattgaaaccgggacgaagctgtatatatccaatcttgattacggggtttct
caagaggatatcaaggagctcttttcagagattggtgatttgaaacgatgtgttgtacat
tatgatcgaagtggaagatcaaagggaacagccgaagtcgtcttctcacgtcgtcaagat
gcattatcagctgtcaccaagtacaacaatgtccagcttgatgggaagccaatgaaagta
gaaattgttggaacaaatatagtgactcctggagctgggccaccaactgcaaatggcaat
ggctcaaactttaatggagttcctagaagtggacaaggaaggggcggatttggaaggtcg
cgcggtggtagtcgaggtcgtggatttggaaggggacgtggaagtggtagaggacgcggg
gagaagttatctcaagatgatcttgacgctgatttagaaaagtatcatgcagagtcgatg
cagataaactga

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