Apium graveolens (celery): 141667954
Help
Entry
141667954 CDS
T11340
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
agrv Apium graveolens (celery)
Pathway
agrv03013
Nucleocytoplasmic transport
agrv03015
mRNA surveillance pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141667954
09122 Translation
03013 Nucleocytoplasmic transport
141667954
03015 mRNA surveillance pathway
141667954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141667954
03041 Spliceosome [BR:
agrv03041
]
141667954
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141667954
TREX complex
141667954
Spliceosome [BR:
agrv03041
]
Complex C
Other components
EJC/TREX
141667954
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141667954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
YHR127W_C
RRM_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
141667954
NCBI-ProteinID:
XP_074330708
LinkDB
All DBs
Position
1
Genome browser
AA seq
243 aa
AA seq
DB search
MSALDQTLDDIIKSNKKSGGGGGRGRGWSFGPGPARRSNNRSSNRAAPYSSSKAPNSAWK
HDMFGSDQAVANQGYGGGNRGSSIETGTKLYISNLDYGVSQEDIKELFSEIGDLKRCVVH
YDRSGRSKGTAEVVFSRRQDALSAVTKYNNVQLDGKPMKVEIVGTNIVTPGAGPPTANGN
GSNFNGVPRSGQGRGGFGRSRGGSRGRGFGRGRGSGRGRGEKLSQDDLDADLEKYHAESM
QIN
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctagaccaaactctcgacgacatcattaaaagcaacaagaagtccggcggc
ggcggcggtcggggcagaggctggtcttttggtcccggtccagctcgccggtccaataat
cgctcttccaatcgagctgctccttactcctcttctaaggcaccaaattcggcgtggaag
catgacatgtttggttcggatcaggcggtggcgaatcagggatatggaggtgggaaccga
gggtcgtctattgaaaccgggacgaagctgtatatatccaatcttgattacggggtttct
caagaggatatcaaggagctcttttcagagattggtgatttgaaacgatgtgttgtacat
tatgatcgaagtggaagatcaaagggaacagccgaagtcgtcttctcacgtcgtcaagat
gcattatcagctgtcaccaagtacaacaatgtccagcttgatgggaagccaatgaaagta
gaaattgttggaacaaatatagtgactcctggagctgggccaccaactgcaaatggcaat
ggctcaaactttaatggagttcctagaagtggacaaggaaggggcggatttggaaggtcg
cgcggtggtagtcgaggtcgtggatttggaaggggacgtggaagtggtagaggacgcggg
gagaagttatctcaagatgatcttgacgctgatttagaaaagtatcatgcagagtcgatg
cagataaactga
DBGET
integrated database retrieval system