Apium graveolens (celery): 141668117
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Entry
141668117 CDS
T11340
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agrv04131
]
141668117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrv04147
]
141668117
Membrane trafficking [BR:
agrv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
141668117
Exosome [BR:
agrv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141668117
Exosomal proteins of bladder cancer cells
141668117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR41
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
ENTH
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
141668117
NCBI-ProteinID:
XP_074330920
LinkDB
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Position
1:149728264..149734057
Genome browser
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCAIFHPKDDLVVSASLDQTVRVWDISALRKKTASPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWAAFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHP
EMNLLAAGHDSGVIVFKLERERPAFSVSGDSMFYVKDRFLRFYEFATQRETQVIPIRRPG
STSLNQSPRTLSYSPTENAILICSDVEGGSYELYVVPKDSISRGDTVQEAKRGIGGSAIF
VARNRFAVLDRTNNQVLVKNLKNETVKKSVLPIAADAIFYAGTGNLLCRAEDKVVIFDLQ
QRIVLGDLQTPFVKYIVWSSDMESVALLSKHSIVIANKKLVHQCTLHETIRVKSGGWDDN
GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVCGNKIFCLDRDGKNRVIVVDAAEYI
FKLSLSRKKYEDVMRMIRNSQLCGQAVIAYLQQKGFPEVALHFVKDERTRFSLALESGNI
QTAVAAAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNTEKLSK
MLKIAEVKNDVMGQFHNALYLGDVQERVKILENAGHLPLAYITASVHGLHEVADKLATAL
GDKVPALPNNKAPSLLMPPTPIVSGGDWPLLRVMRGAFEAGLDNVGKGAPEEEEEVPDGN
WGEELDMVDVEGVDNEESVVVLHDEEAAEENEDGGWDLEDLDLPPEMDTPKASSVNSRVF
VAPTPGIAVSQIWTQRSSLAAEHAAAGNFDIAMRLLSRQLGIRNFGPLKSGFLDLYNGSH
SYIRALTSAAVLSVALERGWTESSSPNVRGPPALVFTFSGLEEKLKDGYKATTAGKFTEA
LRLFLTILHTIPLIVVESRREVDEVKELIVIVKEYVLGLQMELKRKELKDDPVRQQELAA
YFTHCNLQLPHLRLALQNAMTVCFRAKNLNTAGNFARRLLDTNPTNEKQATMARQVLQAA
EKNMKDASQLNYDFRNPFVICGATYVPIYRGQKDVSCPYCSSRFVPSLEGQLCTVCDLAA
IGSDASGLLCSPSQVR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaatttgagactaagagtaatagagtaaaaggactgagtttccacagtaag
agaccgtggattctcgcgagtcttcatagcggtgttattcagctatgggattatcgaatg
ggtacattgatcgataggtttgacgagcacgatggacctgttaggggtgtgcattttcat
aagtctcagccgctttttgtttccggaggagatgattataaaattaaagtttggaactac
aagttacataggtgcttgtttactcttctcggacatcttgattatatccgtactgtgcaa
tttcatcatgagcatccttggatagtgagtgctagtgatgatcagaccatcagaatttgg
aattggcagtcacgaacatgcatatctgttttgaccgggcacaaccattacgtgatgtgc
gctatattccatcctaaagacgaccttgttgtgtcagcatcacttgatcagactgtccgt
gtctgggatattagtgctcttaggaagaagacagcatcccctgctgatgatattctgcgt
ttaagtcagatgaacactgatttttttgggggagttgatgctgttgtcaaatatgtacta
gaaggtcatgaccggggcgtcaactgggctgcatttcatcctagcttgcctcttattgtc
tcaggggctgatgatcgtcaagtcaagttgtggcgcatgaatgatacaaaggcttgggaa
gtggacacattaagagggcacatgaataatgtttcatgtgttcttttccatgccaagcag
gatataattgtttctaactccgaggataagagcattcgtgtttgggatgcaacaaagcgc
actgctattcaaacttttcgtcgtgagcatgatcgattttggattcttgcatctcatcca
gagatgaatctgcttgctgctggtcacgatagtggcgtgattgttttcaagctggaaaga
gagaggcctgcattctcagtgagcggagattccatgttttatgttaaggatcgctttctg
cggttctatgagtttgcaactcagagagaaacacaggttattccaataaggcgccctggc
tctaccagtttgaatcaaagtccgcgaacactgtcatacagtcctacagaaaatgctata
cttatttgttcggatgttgagggtggatcttatgagctatatgtagtacctaaagacagc
attagtagaggagatacagtccaagaagctaaaagaggtattggtggatcagctattttt
gtagctcgaaatcggtttgcagtacttgatagaaccaacaatcaagtgttggtcaagaac
cttaagaatgagacagttaaaaagagtgtcctacctatagctgcagatgcaatattttat
gctggaactggtaatttgctttgtagagcggaggacaaagtggttatttttgaccttcag
caaaggattgttcttggtgatcttcaaacgccttttgtgaagtatattgtctggtcaagt
gacatggaaagtgttgccttgcttagcaaacattctatcgtgatagctaataaaaaactt
gtacaccagtgcacccttcatgaaacaattcgagtaaagagtggtggttgggatgacaat
ggagtctttatttacacaacactgaatcacatcaagtactgccttccaaatggagacagt
gggataataaagacacttgatgttccaatatacatcaccaaagtttgtggcaataagatt
ttttgcttggatcgtgatggaaagaatagggtgatagtggttgatgcagcagaatatatt
ttcaaactgtcattgtcgaggaagaaatacgaagatgttatgagaatgataagaaactca
cagctttgtgggcaagcggtgattgcttatttgcagcagaagggtttcccggaagtggcc
cttcattttgtgaaagatgagagaactcgatttagtttggcactggagagtggtaatatt
cagactgcagttgccgcagctaaggaaattgatgagaaggatcactggtacagattaggg
gtcgaagcccttcgccagggtaatgcaggtatagtagaatatgcctaccagaggacgaag
aattttgaaaggttatctttcctatatcttataacagggaatacagaaaaactgtccaag
atgcttaaaattgctgaagttaagaatgatgtgatgggtcagtttcataatgctctctat
ctcggtgatgttcaagagcgggtgaagattttggaaaatgctgggcacttgccacttgct
tatatcactgcttctgtgcatggcttacatgaggttgctgacaagcttgcaactgcattg
ggagataaagttcccgcattaccaaataacaaagctccctcccttcttatgcccccaacc
ccaattgttagtggtggagattggcccctgttgagagtcatgaggggagcttttgaagct
gggttggataacgttggtaagggtgctccggaggaggaggaagaagttcctgatggtaac
tggggtgaagaattggatatggttgatgtagaaggagtggataatgaggaatcagttgta
gtgcttcatgatgaagaagcagctgaagaaaatgaggatggtggatgggaccttgaggat
ttggaccttcctcctgagatggatactccaaaggcttcttctgtaaactctcgagtattt
gtggccccaactcctggaattgctgtaagccagatatggactcagagatcatctcttgcc
gctgagcatgcagcagctggtaattttgacattgctatgcggttgttaagccggcaattg
ggaattcgaaatttcggtcctttaaaatcagggtttcttgatctttacaatggcagtcat
agttatattcgtgcccttacctctgctgcagtgttatcagttgcattggaacgagggtgg
acggaatcctccagccctaatgtaaggggcccgccagctctagtattcactttctctggg
ttggaagagaaactgaaggatggttacaaagcaactacagctgggaaatttaccgaggct
cttcgactgttcctaactattctgcatactatacctttgattgtagtcgagtcaagaagg
gaggttgacgaagtcaaggaattgattgtgatagtgaaagagtatgtgttgggcctgcaa
atggagctaaagagaaaggaactcaaagatgatccagtccgccagcaagagcttgctgca
tatttcacccattgtaacctccaactaccgcatttaaggcttgcactgcaaaacgcaatg
actgtttgctttagggctaagaaccttaacacagctggtaactttgctagacgccttcta
gatactaaccctaccaatgagaaacaggcaactatggcaaggcaagtgctgcaggctgct
gagaagaatatgaaagatgcatctcagctgaactatgattttagaaatccttttgtgatt
tgtggagccacatatgtccctatttaccgaggacagaaagatgtctcatgcccatattgt
agttcccggtttgtaccaagcttagaagggcagctatgtactgtatgtgatcttgcagcg
atcggctctgatgcttccggtttgctatgttctccatcccaggtcagatga
DBGET
integrated database retrieval system
