Apium graveolens (celery): 141668127
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Entry
141668127 CDS
T11340
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141668127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141668127
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
141668127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Med15_M
FliF_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
141668127
NCBI-ProteinID:
XP_074330931
LinkDB
All DBs
Position
6
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AA seq
903 aa
AA seq
DB search
MDDSSLISPCPLSDFSPMPSPTAPDVYLKRNKRKASEDAAFSTPKISCCCHFTVGDLLKE
LETGKYGDVTKKMNDLYERRMASLEPFYKDLPKCSSSYRSVELDKGTKPSEAARQLTIID
SDEELGDQTPVLHQDVLFTDRFPPYVTKASADGFASIIDKKNIKKDNGDKTKEPGLVGET
CTGKKGAYIGVEDNSTDEQCQNNASEDEEPSLVRETCIEKKGTYIGVEDESTDEDDEQCQ
NNDPELADMFQEMTFALESCKDASANASSDEYATDDEDDCDHSFILRDDIGYVCRICGYI
QRKIDSIIEYQYAKKTSNRTYKYESQSARDEEANDILPGEMRSSGQYFAATEFFAHPRHS
KLMKHHQVEGFNFLARNLVNDNPGGCILAHAPGSGKTFMIISFIQSFMAKYPSARPLVVL
PKGILQTWKKEFLKWQVDDVPLLDFYSVNAKDRSQQLEVLKQWATTRSILFLGYTQFSSI
VCDSTTNENNSACEKILVKQTSILIMDEGHTPRNENTDQLAALERVETPRKVVLSGTLYQ
NHVKEVFNILNLVRPRFLKLESCKDSKRRILSIIETTKKGNLLKKSNREFYEMVEESLLR
DGNLDRKAHIIQGLRDMTSKVLHYYKGDFLDELPGLVDFTLFLNLSPQQKREVVELKKLR
GRFKISSDGGSIYVHPNLKKLIKYTERKDRLDQVKIDKMLRHLDINAGVKAKFYLNLLRL
CESAGEKLLVFSQYLPPMKFLERLTVKVKGWSPGKEIFMITGDLDNDARELNMGHFNDSS
DSRVLFGSIKACSEGISLVGASRIIVLDVHLNPSVTRQAIGRAFRPGQVRKVYVYRLVAA
ESPEEEDHSTCFKKESIPKLWFEWNGVCRPEDFQLEKVDVTDCGDDFLETSRLHEDVHSL
YRR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggacgactcctcgttgatttctccgtgtccgctttcggatttttccccaatgccatct
cccacggctccagatgtgtatttaaaaaggaacaaaaggaaagctagtgaagatgcagca
ttcagcaccccgaaaatctcttgttgctgtcattttacagtaggtgacctcttgaaggaa
ctggagacgggtaaatatggggatgtaaccaaaaagatgaacgacctttacgagcgcaga
atggcttcactagagcctttttataaagatttacccaaatgctcgagcagctacaggtca
gttgaactggataaaggaaccaagcctagtgaagcagcacgtcaattaactataattgat
tcagacgaagagcttggagatcagacacctgtcctacatcaagatgtcctctttactgat
aggtttcctccttatgttacaaaggcttctgcagatggttttgcaagcattattgacaaa
aaaaatatcaagaaagataacggcgataaaaccaaagagcctggccttgttggtgaaaca
tgtaccggaaagaaaggcgcttacattggtgtagaggataattcgactgatgagcaatgt
caaaacaatgcttcagaagacgaagagccaagccttgttcgtgaaacatgtattgaaaag
aaaggcacttacattggtgtagaggatgagtcaactgatgaagatgatgaacaatgtcaa
aataatgatccggagttagccgatatgttccaagagatgacatttgcactagaatcttgc
aaggatgcctctgcaaatgcttcgtctgatgagtatgcaactgacgatgaagatgattgt
gaccattcatttatcttaagggatgacattggctatgtttgtcgtatatgtggatatatt
caaagaaaaattgattccataattgaataccagtatgcaaagaaaacaagtaacaggacg
tataaatatgaaagtcagtccgcgagagatgaagaggccaatgacattctacctggtgag
atgaggtcatctggacagtattttgctgcaactgaattcttcgctcatccaaggcacagc
aagttaatgaaacatcatcaagttgagggctttaattttttggcgagaaaccttgtaaat
gataatccaggtggctgcatcctggcccatgctccaggatctggaaaaacttttatgata
attagttttatacagagttttatggcaaaatacccctcagcacgaccactcgtagtgcta
cccaaaggtatcttgcaaacttggaagaaggaatttctcaaatggcaagtagatgatgtt
cctttacttgatttttattctgtgaatgctaaagatagatctcagcaactggaagttcta
aaacagtgggctacgacacgaagtattctcttcctgggttatacacagttttcttcaatt
gtatgtgactcaactaccaatgaaaataattctgcctgtgaaaaaattctggtaaagcaa
acgtcaattctcatcatggatgaaggtcacactcctagaaatgagaatactgatcagttg
gctgcccttgaaagggttgagacgcctcgaaaggtcgtgctttctggaacgctttaccag
aaccatgttaaggaggttttcaacattctgaatcttgtgcggccaaggtttttgaagctg
gaatcatgcaaggattctaaaaggcgtatattgagtataatagaaaccacaaagaaaggg
aacttgttgaagaaaagtaatcgtgagttttatgagatggtagaagaatcgctcctcagg
gatggcaaccttgaccgcaaggcacacatcatacaaggtcttagggacatgactagcaag
gttcttcactactacaagggtgatttcctggatgaactgcctggtcttgtagatttcaca
ttgtttctcaatctcagcccacaacagaaacgtgaagttgtagaactgaagaaattaaga
ggaagattcaaaattagctctgatggaggttcaatctatgtgcacccaaatttaaaaaaa
cttataaagtacactgaaagaaaagacagacttgatcaggtcaagattgataagatgctt
cggcatttggatatcaatgcaggagtaaaagccaaattttatcttaatctgcttcgtttg
tgcgagtcggccggcgagaagctcctggtgtttagtcaataccttcctcctatgaaattc
ctagaaagattaacagtgaaggttaaaggttggagtccgggcaaggagatctttatgatc
acaggtgatttggataatgatgctcgagaattgaacatgggacactttaacgactcttca
gattccagagttttatttggatctattaaagcctgtagtgaaggtatatcacttgtgggg
gcttctcgaataattgtactggacgttcatttaaacccgtcagttacccgccaggcaatt
gggcgtgcattccgaccaggccaggtgagaaaggtgtacgtataccgactggttgctgca
gaatcacctgaagaggaagaccactccacttgttttaagaaggaatctattccgaagctg
tggtttgaatggaatggggtctgccgtccagaagatttccagctggagaaagttgacgtg
acagattgtggggatgatttcttggagacctcaaggttacatgaagatgttcattctctt
tacagaaggtaa
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