Apium graveolens (celery): 141668194
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Entry
141668194 CDS
T11340
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141668194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agrv03036
]
141668194
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
141668194
SWR1 complex
141668194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141668194
NCBI-ProteinID:
XP_074331030
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Position
6:complement(137596407..137611824)
Genome browser
AA seq
2034 aa
AA seq
DB search
MASKGLKSRFDHEPRTKRQKALEPPKAPGRSKTHWDHVLEEMVWLSKDFESERKWKLALA
KKVAIRASKGMLDQATRGERRVKEEEHRLRKVALNISKDVKKFWIKIEKLVVYKHQLEVG
EKKKKAQNKQLEFLLGQTERYSTMLAENLVASPLPSGPGNSYSNHERFSIQCERSQSDVN
HNDMSNIESKSDLADNDEDYDAASEGQLEDDEHTIEEDEALITVEERQEELAALESEIDL
PLEELLQRYRVEKESSGNSPKKLLGDGKSKENDVSTEFSIERRSTDAVSVRRCEENNGRL
SISENHLMKADVLKARNSSATVEELEKNHTAYDFSDEQEDDDFVFANGDEKDDEATLSEE
ECIANTESNNATDEIALLQKENEIPIEELLARYKKIRSTDDEMEDDSGSEYAAFENLSDA
SAEQTTNAELHTVPVEVNDEPNEHDPVVSPVSREQEAQPDQNCDEVEENESRIADAAAAA
RSAQPTGNTFLTTKVRTKHPFLLKFSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTI
MTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGCAKERKIKRQG
WLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNTKRRI
LLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISGMVDGQEKVNKEVVDRLHN
VLRPFILRRLKRDVEKQLPMKHEHVIYCRLSRRQRNLYEDYIASSETQATLASSNFFGMI
SVIMQLRKVCNHPDLFEGRPIVSSFDMNAIDTQLSSSVCSIFTSSPFSEVDLSGLGLLFT
HLDFHMNSWESDEVQAIATPSSLIEGRASLGNLEEITFRSKHMKKPVGLNIFEEIQQALL
EERIKEAKERSKAISWWNSLRCRKKPIYSTDLRELVTIRNPLFGIDRTEGTTFSYLNSSV
LANIILSPVKRFHKMVDQVESFMFAIPAARAPAPICWCSSTTGSSLFMQPGYKERCAELL
SPLLTPIRPAIVRRQVYFPDRRLIQFDCGKLQELSILLRRLKSEGHRALIFTQMTKMLDV
LEAFISLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGGVGVNLVGADTVI
FYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSG
GYNTDFFKKLDPMDLFSGHRTIPSKHVQVEDLSDDKIQVSLSNADVDAALKNAEDEADYM
ALKKVEQEEAVENQEFTEEAVGRLEDDEIVNEEEGLLSAGNTGLASTSNRENHETIAASD
LIAEGAVTLVSQEDDVDMLADVKQMAAAAAAAGQEILSFESQLRPIDRYAVRFLELWDPV
IDKAAVESQVRFEETEWELDRIEKLKEDMEAEIDDDEEPFVYEQWDAEFATEVYKQQVEA
LAKHQLMEELELEAKEKERADQEYSDSMQNDYVVTPKPKSKKKKKKTKFKSLKKGPLASE
TRAVKEESPVEHVSEPMSVDEDDDPEFITSSDRMPAPTNVEKKRKAAPSSNTSKKAKKAK
KTPADISPSTLDFNLFSKQQDEPKDASHDLEQKPISRTKMGGKISITSMPVKRILTIRPE
KMKKKGSMWSKDCFPSPDSWMPAEDAILCAIVHEYGPHWSLVSDVLYGIAAGGYYRGIFR
HPVHCCERFRELFQRYILSSTEIQNDKLNNAGSGKALLKVTEDNVRLLLGAVSELPDNEP
LIQKHFFVLLSSVWRTSSGRYKKHCNSNSQSSLYPGVRFLMGNHISKPDTAGTSSKMNFA
NLSTSRKLVAAALHDADVTSRHDRVATLSSRGEDCSVADQLVISLELPNGGNGDPVLLPS
IVNVAICGPGPSPSTCTDAGGNKIRSSVVAENRFRTASGSRDEDCMAPISLFSSSVDVES
RMPVKSQSLGKHKLPISESVKSAKSKVRKTITESSDAHCAVDPGFRQIMVAPRVTDSSSP
NAATTNYESSSTFDIEDFLTLDLASSEMSTHYYDPGLTSGLEDYSSFTDFTDIG
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaaaggtctaaagtctagatttgatcacgagccccgcactaagcggcagaag
gcacttgaaccaccaaaagctcctggacgctccaaaacgcattgggatcatgttctagaa
gaaatggtttggctatcgaaggattttgagtcggagagaaaatggaaattggccctggca
aagaaggttgctataagagccagcaaaggcatgttggatcaggccacacggggtgaaaga
agagtgaaggaggaagagcatcgattgagaaaagttgccctcaatatatccaaggatgtg
aagaaattttggatcaagattgaaaagctggtggtctataagcatcagcttgaagttggg
gaaaaaaagaaaaaagcacagaataaacagcttgagtttcttttagggcaaacagaaaga
tactcaacaatgttggcagaaaaccttgttgcctcaccacttccttctggaccaggaaat
tcttactcaaatcacgaacgtttcagcattcaatgcgaaagaagccaaagtgacgtcaac
cacaatgatatgtcaaatattgaatcaaagtcagatcttgccgataatgacgaagattat
gatgcagcatctgaagggcaattggaggatgatgaacatactattgaggaagatgaggcc
ctcataactgtagaggaaagacaggaggaacttgcagccttggaaagtgaaattgatcta
cctcttgaagagctacttcagcgttacagagttgagaaagagagcagtggaaacagccca
aaaaagttactaggtgacggtaaaagtaaagaaaatgacgtgtcaactgaatttagtatt
gaaaggcgcagcaccgatgcagtttctgttcgtcgttgtgaagaaaataatggtaggtta
tcaatttcagaaaaccatttaatgaaagctgatgttctaaaagcaagaaattcaagtgca
actgttgaagagctggaaaaaaatcacacggcatatgattttagtgatgaacaggaggac
gatgactttgtttttgccaacggagatgaaaaggatgatgaggcgacattgtcagaggaa
gagtgcatagcaaatactgaatcgaataatgccacagatgagatcgcattgttgcagaag
gagaatgaaattcctatagaagaattgcttgcaaggtataaaaagattcgaagtactgat
gatgagatggaggatgattctgggtctgagtatgctgcttttgaaaatctttcggacgct
tcagcagagcaaactactaatgcagaactgcatactgttcctgtggaagtaaacgatgag
ccaaatgaacatgatccagttgtgtctcctgtttctagagaacaagaagcacaaccagat
cagaattgtgatgaagtagaggagaatgagagcaggattgccgatgcagctgctgctgca
agatcagcacaaccaactggaaatacattcttgaccaccaaagttcgtacaaagcaccct
ttcctcctgaagttctctcttcgtgagtatcaacatattggcttggactggctggtgaca
atgtatgagaagagactaaatgggattttagctgatgaaatggggcttgggaagacaata
atgactattgctctgcttgctcacctagcatgtgaaaaaggaatatggggtccccatctt
atagttgttccaacaagtgtaatgctgaattgggaaactgagtttctcaaatggtgtcct
gcttttaagatactaacttattttggatgtgcaaaagaacggaaaataaaaagacaaggg
tggctgaagccaaattccttccatgtatgtataacgacttaccgactagttatccaagat
tctaaagtctttaagaggaagaagtggaaatacttgattttggatgaagctcatttaata
aaaaactggaaatctcagaggtggcaaactcttctgaatttcaatacaaagcggcgaatc
cttttaacaggaactcctttgcagaatgatttaatggaactatggtcgcttatgcatttc
ttgatgcctcacatatttcagtctcatcaagaatttaaagactggttcagcaatccaata
tcaggaatggttgatggtcaagaaaaggtaaacaaagaagttgttgataggttgcacaac
gttctccgcccctttattctccgtcgattaaaaagggatgtggagaagcaactaccaatg
aaacatgaacatgttatatattgcagactctcaaggagacagcggaacttgtatgaagat
tatattgctagctcagagacccaagcaactctggcgagctccaatttctttggaatgatc
agtgttatcatgcaacttcgcaaagtctgcaatcatcctgatctttttgaaggtcgtcca
attgtcagttcatttgatatgaatgccattgacacccaactgagttcttctgtttgctca
atctttacaagtagcccattttctgaagttgatctcagtgggttgggattattatttact
catctagactttcatatgaactcttgggagagtgatgaagttcaagctattgccacccct
tcaagcttaatagagggacgggccagcctgggaaatcttgaggaaataacttttaggtcc
aagcatatgaagaagccagttggattaaacatttttgaagaaattcaacaagctctcttg
gaggagagaatcaaagaagcaaaggaacggtcaaaagctatttcatggtggaattccttg
cgatgcaggaagaaacctatttattcgacggatctgcgagaacttgtaacaatcagaaac
cctctcttcggcattgacagaactgaggggacaacgttttcctacttgaactcttctgtg
cttgctaacattattttgtctccagttaaacggttccataaaatggttgatcaggttgag
agttttatgtttgcgattcctgcagcacgggccccagcccctatttgttggtgcagcagt
acaactggaagttctctttttatgcaaccaggatataaggagagatgtgctgaactcttg
tcaccccttctgacacctatccggcctgcaattgtcaggaggcaagtttatttccctgat
agaagactaattcaattcgactgtggtaagctgcaagaactttccattttgttgaggaga
ctaaaatcagaaggtcacagagcactgatttttacacaaatgactaaaatgttggatgtc
ctagaggcctttataagcttatatggctacacctacatgcgcttggatggctccactcaa
ccggaggagaggcaaacattaatgcagcggtttaacacaaatccaaagtattttctcttt
atattgtcaacacgaagtggtggtgttggtgtcaatttagtcggggcagatacagttatc
ttttatgatagtgattggaatcctgctatggatcaacaggctcaagatcggtgccaccgt
ataggacagacacgtgaagtacatatttatcggttaatcagcgagagcactattgaagaa
aatattttaaagaaagcgaatcagaagcgtgctcttgatgacttggtcatacagagtgga
ggctacaacacagatttttttaagaaactagatccaatggatttgttttctggtcataga
acaattccctcaaagcatgtgcaggtggaggatctgagtgatgacaagatccaagtctca
ttatctaatgcagatgttgatgctgcattaaagaatgctgaagacgaagcagactacatg
gctctgaagaaagttgagcaggaagaggctgtggagaatcaggaatttactgaggaagct
gttgggaggttggaggatgatgaaattgtgaatgaggaggagggtcttttgtcagctggt
aacactggtttggcttcaacatctaatagagaaaatcatgaaacaattgctgcaagtgat
ttgattgcagagggagctgttaccctggttagtcaagaagatgatgtcgacatgctagct
gatgttaaacaaatggctgctgctgctgcagcagcagggcaggaaatattatcttttgag
agtcagctgcggccgattgaccggtatgcagtacgttttctggagttatgggaccctgtc
atagacaaggcagctgtggaatcacaagttaggtttgaggaaactgaatgggaacttgat
cgcattgagaagttgaaggaggacatggaagctgagatcgatgatgatgaggaacctttt
gtatatgaacaatgggatgctgagtttgcaactgaagtttacaagcagcaagttgaagcc
ttggccaaacatcagttaatggaagaattggaattggaagctaaagagaaggagcgtgca
gatcaagaatattctgactctatgcagaatgattatgttgttactcctaaacccaagtca
aaaaagaagaagaagaaaaccaagtttaagtctctgaagaaaggaccactggcgtctgaa
acaagagctgttaaggaagaatcacctgtagaacatgtttctgagccaatgtctgtagat
gaggacgacgatcctgaatttattacctcttcagacaggatgccagcacctaccaatgtg
gaaaagaagcgtaaagcagcaccaagcagtaatacctcgaagaaggccaagaaggcaaag
aagacccctgcagatatttctccatcaactttggattttaatctgttcagtaagcagcag
gatgaaccaaaagatgctagtcatgatcttgaacagaagccaataagcaggaccaagatg
ggagggaaaatctctattacatcgatgcctgtgaagcgaattctgaccataagaccggag
aaaatgaaaaagaagggaagtatgtggtctaaagattgcttcccttctccagattcttgg
atgccagctgaagatgcaatactatgtgctattgtacatgaatatggcccacactggagc
ttggtcagtgatgttttgtatgggattgctgctggtgggtattacaggggaatatttaga
catcctgtccattgttgtgaaaggtttagagaacttttccaaagatatattttatcatca
acggaaatccagaatgacaagctaaataatgcagggtcagggaaggctcttcttaaagta
acagaggataatgtccgcttattgttgggtgctgtttctgagcttccagataatgagcct
cttattcaaaagcacttttttgtgctgctttcttctgtctggagaacgtcatctgggcgc
tacaaaaaacactgcaactcaaattctcagtctagcctttaccctggtgtaaggttcctc
atggggaatcatatatctaaacctgacacagcagggacatcttccaaaatgaactttgca
aatctaagcacgagtagaaaattagtagcagctgccctgcatgatgcagatgttacatca
cggcatgatagagttgccaccctcagctctaggggtgaagattgtagtgttgcagatcag
ctggtgatttcgcttgaacttccaaatggcgggaatggtgacccggttctgttgccatcc
attgtaaacgtggcaatatgtggccctggaccatctccgtcaacatgcacagatgctggt
ggtaataagattagatcttctgttgtggcagaaaacagatttaggaccgcttctggatct
agagatgaagattgtatggcgccaatttcattgttttcctcatcagttgatgtggagtca
cggatgcctgtgaaatcacaatccttgggaaaacacaagctgcctatctctgagtcggta
aagtctgccaagtcaaaagtgaggaagactatcacagaatccagtgacgctcattgtgct
gttgatccaggtttccgacaaataatggtggcaccaagggttactgattccagtagtcca
aatgctgcaactactaattatgaaagtagttcaacctttgacattgaagactttttaaca
ttggatttggcaagttctgaaatgtccacgcattattatgatcctggtttaacttcaggt
ttagaagattattcatcatttacggactttacagacattgggtaa
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integrated database retrieval system
