Apium graveolens (celery): 141668233
Help
Entry
141668233 CDS
T11340
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00900
Terpenoid backbone biosynthesis
agrv01100
Metabolic pathways
agrv01110
Biosynthesis of secondary metabolites
Module
agrv_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141668233
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
agrv01006
]
141668233
Enzymes [BR:
agrv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
141668233
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
141668233
2.5.1.29 geranylgeranyl diphosphate synthase
141668233
Prenyltransferases [BR:
agrv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
141668233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
141668233
NCBI-ProteinID:
XP_074331115
LinkDB
All DBs
Position
6:5145579..5146905
Genome browser
AA seq
376 aa
AA seq
DB search
MATVMNLSITTNATLFHNSYVKHKSTSKLVHHRRLYSSSNRPFSQSKKIMPSSSSSSSSS
SSSLSVPISTKTVSDPSLTPSTFDFKSYMLEKAISVNNALDTAVSLGDPIKIQESMRYSL
LAGGKRIRPILSIAACELLGGHESTAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPT
NHKVYGENVAVLAGDAMLALAFHLVATKTKGVSSAQVVRILVELAKASGAQGLIAGQIVD
VCSEGDSNLGLKDLEFIHRNKTAALLEVSVVMGAILGGGNEEQVEKLRKYARCIGLLFQV
VDDILDVTKSSKQLGKTAGKDLVADKTTYPKLIGIHKSKQFAHKLNKEAIDQVVGFDSDK
AAPLIAMANYIAFREN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtcatgaacctcagcataaccacaaacgcaaccctttttcacaattcatat
gttaaacacaaatcaacttctaaacttgtgcatcatagacgactctactcatcatcaaac
cggcctttttctcaatccaaaaaaattatgccttcttcttcttcttcttcttcttcttct
tcttcttctctttcggtccctatcagtactaaaacagtttccgacccatcactcacacct
tccacattcgatttcaagtcttatatgctggaaaaggccatttctgttaacaatgcctta
gacactgctgtttcactcggagaccctatcaaaattcaagagtcaatgcgttactctctc
cttgcaggtggcaaacgtatccgtcccatattaagtattgccgcctgtgagcttttggga
ggacatgagtctactgccatgccctccgcatgtgcagtggagatgatccacactatgtca
ctcatgcacgatgatctcccttgtatggacaacgatgatctccgacgtggcaagcctact
aaccacaaagtttacggtgaaaacgttgctgttctggctggagacgctatgttagccctc
gcttttcaccttgttgctactaagacgaaaggagtttcttctgctcaagttgtccgaata
ttagttgagctagccaaggcaagtggagctcaaggactaattgcagggcagattgtagat
gtatgttccgaaggtgattctaatctaggattaaaagatttggagtttattcatcgtaac
aaaaccgcagcgttactggaagtttcggttgtaatgggggcaattttaggaggtggaaat
gaagagcaagttgagaaattgagaaaatacgcgaggtgtattggattgttgtttcaagtg
gtggatgatattcttgatgttacaaagtcttccaaacaattagggaaaacggcaggcaaa
gatttggtagcggataagacaacatatcctaaactcattgggattcacaaatcaaaacag
tttgctcataagttgaacaaggaagctattgatcaggttgttggatttgattctgataag
gctgcacctttgattgctatggctaattatattgcatttagagaaaattga
DBGET
integrated database retrieval system
