KEGG   Apium graveolens (celery): 141668311
Entry
141668311         CDS       T11340                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
agrv  Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:agrv03016]
    141668311
Enzymes [BR:agrv01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     141668311
Transfer RNA biogenesis [BR:agrv03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    141668311
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf-CCCH_PARP12 zf-CCCH_tandem zf_CCCH_4
Other DBs
NCBI-GeneID: 141668311
NCBI-ProteinID: XP_074331228
LinkDB
Position
6:complement(262477178..262482556)
AA seq 696 aa
MSTLLPEPNTNGSDPMALQPENLGDPNAAKDTEKPLATAEELIAKAIAPVKQQFLCHNPI
KSSIQQPSNDVVLDTKPSSNASVVKEKKSKRQAKRERKQEQKSVLHLCPVIAKSGNLSSC
QYGDKCRFSHDVDGFKSEKPVDLEGNCPFLKEEGPCPYGLACRFFGTHKADTGTISTQTR
ESETNGLRKDVQKLLWKNKMKFPKADAQLKILGLLQKQANSKKKDLADDEEEDLTVSTAS
HVNEGNGCAEVDMSIRSDCCTEVVEEDVKIYDTSMPDELRPLKKAKASINESQSCEVNNG
SSVQEKDLEECVKPTSTDSHIATETDKSLKTHAREKKLIDFSDKLYLAPLTTVGNLPFRR
VCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDIFGVQICGAYPDTVSRAVELID
QECTVDFIDINMGCPIDLVVNKGAGSALLTKPVRIKNVLQVASGTVDKPITVKVRTGYFE
GRNRVEGLINDISNWGASAITIHGRSRQQRYSKLPDWEYVYGCARKAPDALQVIGNGDVY
SYLDWNKHKTACPNLSTLMIARGALMKPWIFTEIKEQRHWDISSAERLNILKDYVHVGLE
HWGSDSKGVETTRHFLLEWLSYTYRYIPVGVLDVVPAQLNWRSPSYFGRDDLETLMASDS
AADWIKISEMLLGKVPAGFTFSPKHKSNSHDRAENG
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgtctacgcttcttcctgaaccaaacacaaacgggtcggatcctatggcactccaaccc
gaaaatcttggtgacccaaatgcagctaaagatacagagaagccattagctacggctgaa
gagcttatagcaaaagccatagctcctgtaaagcaacaatttttatgtcataatcccatt
aaatcttcaattcaacaacccagtaacgacgtcgttttggataccaagccttcttcaaat
gcctctgttgttaaagagaagaaatctaaacgccaggccaagagggaacgtaaacaggag
cagaagtctgtccttcatttatgtcctgtgattgcaaaatctggaaatcttagttcatgt
caatatggagacaagtgccgtttcagccatgatgtagatggttttaagtctgagaaacca
gtggatttggagggaaattgtccttttttaaaggaggaaggtccatgcccttatgggctg
gcctgtagattttttggtacacataaagctgatactgggacaatcagtactcaaacaagg
gaatctgagactaacggactgagaaaagatgttcagaagctcttgtggaaaaacaaaatg
aaatttcccaaggctgatgcccaactgaaaatactcggacttttgcaaaaacaggctaat
tcaaagaagaaagatttggcagatgatgaagaagaggatcttacagtttcaactgcttca
catgttaatgaaggaaatggttgtgctgaagtggacatgagtattagatctgactgttgt
actgaagtggtagaagaagatgtcaagatatatgacacttctatgcctgatgagctcaga
cctttaaaaaaagccaaggcatcaatcaatgaaagtcagtcatgtgaagtaaataatggt
tcaagtgtccaggagaaagatctagaggagtgcgtgaaacctacaagtacagacagccat
attgctaccgaaacagacaaaagcctaaaaacacacgctcgagaaaagaaacttattgat
tttagtgacaagctctatcttgcacctcttacaactgttggaaatcttccttttcgaagg
gtttgcaaggtgttaggtgctgatgtaacatgtggtgagatggcaatgtgcaccaacctc
ttacagggccaagcatctgaatgggctcttcttagacgacattcttcagaggatattttt
ggtgtccaaatctgtggggcatatccagatacggtttcacgagctgttgaacttatagat
caggagtgcactgtggatttcattgatattaatatggggtgtccaattgaccttgtagtt
aacaagggtgctgggtcagctcttcttacgaaaccagtgagaataaaaaatgtcttacag
gtagcttcaggcactgtggacaagccgataaccgtcaaggtacgaacaggatactttgag
gggagaaaccgtgttgagggtttaataaatgatattagtaactggggagctagtgctata
actatacatggccgatcacgtcagcaacgatatagcaagcttcccgattgggagtacgtg
tacggttgtgctagaaaagctcctgatgcattacaagtcataggaaacggggatgtttat
tcttatttagattggaacaagcacaagactgcctgccccaacctttccacactcatgatt
gctcgaggtgcactgatgaagccctggatttttactgaaattaaggaacagaggcattgg
gatatcagttctgcagagagactcaacatattaaaagattatgtgcatgttggccttgaa
cattggggctctgattcaaaaggtgtagagacaacaagacatttcttgctagaatggctt
agttacacatatagatatattccagttggtgtactagatgtcgtccctgctcaactaaat
tggcggtccccttcatacttcggtcgtgatgatcttgagaccttaatggcctccgattct
gctgcagactggatcaagatatctgagatgttgctgggcaaggttccagctggatttaca
ttttcaccaaaacataaatcaaattctcatgaccgtgcagaaaatggctga

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