Apium graveolens (celery): 141668652
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Entry
141668652 CDS
T11340
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141668652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141668652
Enzymes [BR:
agrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
141668652
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
141668652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
141668652
NCBI-ProteinID:
XP_074331718
LinkDB
All DBs
Position
6:70209200..70215759
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AA seq
727 aa
AA seq
DB search
MASEGLAQLPAGVTNPLSLTGPTQSDFTRNNQLQKLLEDAELYETPEEASKRQHVLTRIR
KIVIDWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGDAFALWNRFKLWLVTLYWQVHGP
GADIDTLCVGPSYVNREEDFFFMLHNILEEMEEVTELQPVPDAHVPVMKFKFDGISIDLL
YASVSLLVVPEDLDISDVSVLYNIDETTVRILNGCRVADQILKLVPNVEHFRTTLRCLKY
WAKRRGVYSNVTGFLGGVNWALLVAKVSQMYPNAIPSMLVSRFFRVYTQWRWPNPVMLCA
IEEDELGFSIWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFHCGNKICE
EIELNKSQWGALFERYMFFEGYKNYLQVDIFAADGDDLRAWKGWVESRLRQLTLMIERDT
CGKLQCHPYPHDYVDSSKQCSHSAFFMGLQRKEGEVIQEGQQFDIRGTVDEFRHSVNMYV
FWKPGMEISVSHVSRRRIPSFVYPEGYRRSRPPRQHQDQSSPIDEGCRPGSAGRQPRRRR
EFNAANGQGSPEKRQCSASPQNCDSLSPNIVSYVDRHALKECSSSGVEVQRTEEMAEVNG
TQRAQKVEGNSELVVRQVESEQQSISGRADGCLSNSSVVTSLASEVGSVVDRGPASRTGS
SEGKPGSVVCSSSQVSSHGDSCDSDSGFLVNDGCAIDGKVSESGSKDELELGTAFQRAIV
SGDDNAF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgagggtttggcccagctccccgccggtgtcactaatcccctctctctcacc
ggccccactcaatctgactttactcgaaacaatcagcttcaaaagcttctagaagatgct
gaattgtacgaaacccccgaagaagcttctaagcgacaacatgttcttactcgtatacgc
aagatcgtcatagattgggttaagcaactaacccgcttacgaggatacactgatcaaatg
gttgaggatgccaatgctgtcatttttacttttggttcttatcgtctaggggatgccttt
gcgctttggaataggtttaaactatggttggtaacgttatattggcaggtccatggtcca
ggagcagacattgatacactatgtgtaggaccatcttatgtcaatcgggaggaggacttt
ttctttatgctacataacatcttggaggagatggaagaagttacagaactacagcctgtg
ccagatgctcatgtcccagtcatgaaatttaagtttgatggaatatcaattgatcttctt
tatgcaagtgtgtctcttttggttgtgcctgaggacttggatatctccgatgtgtctgtt
ctatacaatattgacgagacaactgttcgcattttaaatggctgtagggttgctgaccag
atcctaaagcttgtaccaaatgttgagcattttcgcactacgctccgctgtttgaagtat
tgggcgaagaggcgtggtgtttattctaatgtgactggatttcttggcggtgttaactgg
gctcttcttgtagctaaggtttctcagatgtatcctaatgccattcctagtatgctggtt
tctcgtttttttagggtatatacgcagtggcgctggccaaatccagtaatgctttgtgcg
atagaagaagacgagcttggtttttctatctgggatcctcgtaaaaatcctcgtgataga
actcatcatatgccaatcatcacccctgcttacccatgtatgaattctagctacaatgtc
tcaaccagtactcttcgtgtgatgatggagcagttccattgtggcaataagatttgtgag
gagattgagctgaacaagtcacagtggggcgctttgtttgagcggtatatgttctttgaa
ggctataagaattatttgcaggtagatatttttgctgctgatggagatgatttgcgtgca
tggaaaggatgggttgaatctcgactgagacaattgactctgatgattgagcgggacacg
tgtggaaagttgcagtgtcatccgtatcctcacgattatgttgattcatcaaagcagtgc
tcccattctgccttttttatgggcttgcaaaggaaagaaggtgaggtaatacaagaaggt
cagcagtttgatatacgggggacagttgatgagtttcggcattctgtgaatatgtatgtg
ttctggaagccgggaatggaaatttccgtgtcacatgtcagtaggcggcggataccttct
tttgtgtatccagaaggctatagaagaagtcggccaccaaggcagcatcaagatcaatct
tctcctatagatgaaggttgcaggccaggatctgctggaagacaaccaagaaggagaaga
gaatttaatgcggcaaatggacaaggcagtcctgaaaagcgccaatgcagtgcaagccct
cagaattgtgattcattatctcctaatattgtaagttatgttgacagacatgcattgaaa
gagtgttcatcatcaggggttgaggttcaaagaacagaagaaatggctgaagtaaatgga
actcaacgtgcccaaaaggttgaaggcaatagtgagttggtggtcaggcaagttgaatct
gagcagcaaagtatctccggaagagctgatggatgtctttcaaattccagtgttgtcacc
agccttgcaagcgaagtaggctctgtagtagacagaggacctgcgtcacgaactgggagc
agtgaaggcaaacctgggagcgtcgtttgcagcagcagtcaggtatcttcgcatggtgat
tcatgtgactcagattctggcttccttgtgaatgatggatgtgcaatagatgggaaggtg
tctgaaagtggttcaaaggacgagttggagctaggtactgcctttcagagagcaatagtg
tccggtgatgataatgctttttag
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