Apium graveolens (celery): 141668923
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Entry
141668923 CDS
T11340
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141668923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141668923
03036 Chromosome and associated proteins [BR:
agrv03036
]
141668923
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141668923
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
141668923
Chromatin remodeling factors
BAF complex
141668923
PBAF complex
141668923
GBAF(ncBAF) complex
141668923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
141668923
NCBI-ProteinID:
XP_074332088
LinkDB
All DBs
Position
6:complement(1511513..1525375)
Genome browser
AA seq
2214 aa
AA seq
DB search
MQSGGGHGRNTAASASASPSSSSSGFDPIQQQQQQLQQRQQQELQQRQSFHQQLLRKPDG
NEAMLAFQGGLHGVLGGNFGSNSGPMQLPVQSRKFTDLGQQHGSPHSREEAQNRSQGFDQ
QMLNPVQQAYLQYHPAQQKSGLGMQSQHSSMVGHSGKDHGLQMGNMKVPDLMSIQATQAP
SPLLLNKPSEHFVRGDKISEDQQQISDQRTDSKQPVVQTSLGQLMPGNVMRPMPTPQSQQ
NIQNMNNSQLVMAQMQAMQALALERNIDLSNPANANLVAQLIPFMQSRMVAQHKANESNM
GAQSSLVPMTKQQVTSPQVANESSPRGNSSSDLSGHSASGKAMRQAGQPGTFGASTPLIH
NANNNPSQPFSGRSSESQPSARQPTMINNASMHPPQSSVNLNQGVDLSAPGKSKLSGPET
LQLQYNNPIRRSSPLSTTSSNEGKLVNPSSSQGGPLPHLQQPLGFTKQQSHVLKAQILAF
RRLKKGDGTLPRELLQAIAPPPLEKQMFQMSHPGATDTSAGKNADTEDLRHIESSEKDPH
ADSSTAGLTSLRREAVAGDEKTILSRQMVPAVLKEPLSSVPSREEHQTTPVSAKIEEGEE
HGISEDAITRSDMHVNKGKAVAIPAPLLETVQVKKPLQTITHQPKDAGTTRKYHGPLFDF
PFFTRKHDSFGSSGIVNNNNNMTLAYDLKDLLFEEGREVLNRKRTENIKKIGDILAVNLE
RKRIRPDLVLRLQIEEKKLKLLDVQARLRDEVDQHQQDIMAMPDRPYRKFVRLCERQRAD
LSRKVQASQKAIREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLKEFSKRK
DDDRSKRMEALKNNDVERYRQMLLEQQTSIPGDGAERYAVLSSFLSQTEEYLHKLGSKIT
ATKSQQEVEEAANTAAAAARAQGLSEEEVRAAAACAGEEVTIRNRFSEMNAPKDSSSVNK
YYNLAHAVNERVFRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVM
ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGQKDQRIKLFSQEVC
AMKFNVLVTTYEFVMYDRAKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLT
GTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQREGPSQNGEDDWLETEKKVIII
HRLHQILEPFMLRRRVEDVEGSLPPKVSIILRCRMSAIQGAIYDWIKATGTLRVDPEDEK
LMSQKKPMYQTKVFRTLANRCMELRKTCNHPLLNYPYFNDFSKDFLVRSCGKLFVLDRIL
IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGSTSLEDRESAIVDFNSPDTDC
FIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQQREVKVIYLEAVVD
KISSHQKEDEYRGGGTVDSEDDLAGKDRYMGSIEGLIRNNIQQYKIDMADEVINAGRFDQ
RTTHEERRLTLESMLHDEERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDEEFDWEED
MTRYDQVPKWLRASSKEVNDTIAKKSSKKSALYGGNIGAESNELEKKRGRTKGKKFPVYT
ELDDEIDDFSEASSEERIGYSGNEEGEIGDPEDDDFIADAPAGNSDQPDDGTPATEVYED
PRPIEGHRPNHIPEEGGSSGSSSGSRRLIQRVSPSISAQKFGSLSALDARPGSVSNRLPN
DLEEGEIALSGDSLMDRQHSGSWIQDRDEGEDEQVLQPKIKRKRSIRIRPRLATEKPEEK
ATEKLSLRRGDSSHVSSQMDHKYESRVKNEREQKLIVEPNSQKLEKSDPSLKTRKGSHSR
KNSNSGKLLASQKPGKVNVMPAPLEDAIENSRESWDNKAMYKVGNSIDKKMSDGIQHRCK
NVINKFQRRIDREGHQIVPLLTELWKKSETTGYMGGNSQLDIRKIYQRLENFEYNGVMEL
CSDVQLMLKGAIQYYGFSHEVRTEARKVHDLFFDLLKVTLPEIDFREARSAVSFSGHVAS
SSAPSSRQILAGQGKRQKQANEVDLDHSHSQKPLSRVSHASEDTRNRSHMPQRETRFGNS
NSNKESGQHEDSRLFAHPGELVICKKKRKDREKSVVKSGNGSASQLSPASVGRIRSPGSG
SVSKDTRLVQQTSQQQGWTNSPQQASESRSGNIGWANPVKRMRTDTGKRRPSQL
NT seq
6645 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgggcggaggacatgggcggaacacggcggcgtctgcttcggcgtcgccgtcg
tcttcgtcgtcaggtttcgatccaattcaacaacagcaacagcaattacagcagagacag
cagcaggagttacagcagagacagtcattccatcagcaattacttagaaagcctgatgga
aatgaagccatgttagcattccaaggtggacttcatggagttttgggaggaaactttggg
tcaaattctggccccatgcaacttcctgtacaatctagaaagtttacggatctaggccaa
cagcatggttctccgcatagtagggaggaagctcaaaataggagtcagggatttgaccaa
caaatgctgaacccagtacagcaggcctacttgcaatatcaccctgcacaacagaagtca
ggtttggggatgcagtctcagcattcaagcatggttgggcattctgggaaggaccatggc
ttgcagatgggaaatatgaaagtaccggatctcatgtcaattcaagctacccaggctccc
tcaccattgctgttaaacaagccatcagagcattttgttcgtggggataagataagtgaa
gaccagcaacagatctctgatcagaggactgattcaaagcaacctgttgtgcaaacatca
ctcggacaattgatgcctgggaatgtgatgaggcctatgccgactccacaatctcagcaa
aacatacaaaatatgaataacagccagctggtaatggcacagatgcaggctatgcaggca
ttggcactcgaacgtaatattgatttatcaaatcctgcaaatgcaaatttggtggcacaa
cttattccatttatgcaatccaggatggttgcccagcataaggcaaatgaatccaatatg
ggtgcacaatcgtcattagtcccgatgacaaagcagcaggtgacttcaccgcaagttgcc
aatgaaagttcaccccgtggtaactcttctagtgatctgtcaggacactccgcttcaggt
aaagcaatgagacaggcaggtcaacctggcacctttggtgcatccactcctctaattcac
aatgccaacaacaatccatcacaaccattttctggtcgtagcagtgagagtcaaccgtct
gcaagacaaccaaccatgataaataatgcttccatgcatcctcctcagtcgtccgtaaac
ctgaaccaaggtgtagatctttcagcacctggtaaaagcaaattatctggtccagaaact
ctgcagctgcagtataataatcctatccgccgatcttctcctctatctacaacttcatca
aatgaagggaaattagtgaatccttcatcatctcagggtggaccactccctcatttgcaa
caaccattaggatttaccaaacagcaatcacatgttcttaaagcccaaatattggctttt
aggcgtttgaagaaaggagatggaacccttccccgtgagttactgcaggctattgctccc
ccacctcttgagaaacaaatgtttcagatgtcacatcctggggcaacagatacatctgct
ggtaaaaatgccgacacagaagatctgagacatattgaatccagtgagaaagatccacat
gctgattcatcaactgccgggctaactagtttgagaagggaagcagttgcaggagatgag
aaaacaattctttcaagacaaatggtacctgctgtcctgaaggagccattatcatcagtt
ccttctcgagaagaacatcaaactactcctgtttctgctaaaatagaagagggtgaagaa
catgggatttcagaagatgctattacaagaagcgatatgcatgtcaataagggtaaggcg
gttgctataccagctcctctgcttgagacagtgcaagtgaagaaacctctacaaacaatt
acccatcaacccaaagatgctggaactactagaaagtatcatgggccgctgttcgatttc
cccttctttactcggaaacatgactcctttggatcatcaggaatagtgaacaacaataac
aatatgaccttggcatatgatttgaaggatcttctctttgaggaaggcagggaggttctt
aacaggaagaggacggaaaatattaaaaagattggtgatatacttgcagtaaatttggaa
aggaaaagaattagacctgatcttgttttacgtttgcaaattgaagaaaagaagttaaag
ctgttggatgtgcaggcacgcttgagggatgaggtcgatcaacaccagcaggatataatg
gcaatgcccgacaggccgtatcggaaatttgtacggctctgtgagcgccaacgtgcagat
ctcagcaggaaagttcaagcctctcagaaagcaattagggagaagcagttaaaatcaatt
tttcagtggcgtaagaagctacttgaggctcactgggccattcgtgacgctcgaactgca
cgtaacaggggagttgccaagtatcatgagcgaatgttgaaggagttctcaaaacggaag
gatgatgatcgcagtaaaagaatggaggctttaaagaataatgatgttgaaaggtatcgc
cagatgttgctagagcaacagactagcattcctggtgatggtgccgagcgatacgctgtc
ctctcatcatttttgtcgcagacagaagagtaccttcacaagcttggtagtaaaataact
gcgacaaagagtcaacaggaggttgaggaagcagcaaatactgctgcagctgctgcgagg
gctcagggtctatcagaagaagaagtaagagctgcagcagcttgtgctggtgaggaagtt
acaataagaaatcgtttctctgagatgaatgcgccaaaagatagctcatccgttaacaag
tattacaatcttgcacatgcagtcaatgagagagtttttaggcagccctcaatgctacga
gctggaactttacgagactatcagattgttggtttgcaatggatgctttctttgtataac
aacaaactcaatggaattttagcagatgagatgggtctagggaagacggtacaggttatg
gcattgattgcttatctgatggagttcaaagggaactatggcccacatctcattattgtt
cccaatgctgtgctggtcaactggaagagtgagcttcacaactggctaccatcagtgtct
tgtatttactatgttggtcaaaaggatcagcgtataaaactattttcacaagaggtatgt
gcgatgaagtttaatgtacttgtcacgacctatgagtttgtcatgtatgaccgtgcaaaa
ctctcgaaggttgactggaagtatattataattgacgaagcacagcgaatgaaggacagg
gaatctgttctggcccgtgatcttgatagataccgctgccaaaggcgcttgcttctcacg
ggaacacccttgcagaacgatcttaaggagctttggtcacttctaaatttactccttcct
gaagtgtttgataatcggaaagcatttcatgattggttttccaaaccttttcaacgggaa
ggtccttcacagaatggtgaggatgactggcttgagacagagaaaaaggttatcattatt
cacagacttcatcaaattctcgagccttttatgctcaggcgtcgtgttgaagatgtggaa
ggttcactccctcctaaggtgtcaattatattaagatgtagaatgtcagctattcaaggt
gccatttatgattggatcaaagctactggtactctacgtgttgaccccgaagatgagaag
ctgatgagtcagaaaaagcctatgtatcaaaccaaagtatttagaacattggctaatagg
tgtatggagcttcgtaaaacttgcaatcaccctctacttaattatccatatttcaatgat
ttctccaaagactttcttgtcagatcatgtggaaaattgtttgttctagataggatttta
ataaagcttcaaagaacagggcaccgagtattgctttttagtaccatgacaaaactcctt
gacattttggaagaatatttacagtggcggagacttgtttaccgccgaattgatgggagt
actagcttagaagaccgagaatcagctattgttgacttcaatagtcctgatactgattgc
tttatcttcttactaagcattcgtgctgctgggagaggcttgaatcttcagacagctgac
acagttgtgatatatgatcctgatccgaaccctaagaatgaagagcaagcagttgctaga
gcccaccgcattgggcagcagagagaagtgaaagtaatttatttggaagcagtggttgat
aaaatctcaagtcatcagaaagaagatgaatacaggggtggaggtacagttgattcagag
gatgacctcgcagggaaggatcgatatatggggtctattgaaggtctcatacggaataat
atccagcagtataagattgacatggctgatgaagtcattaatgctgggagatttgaccag
aggacgacacatgaagagagacgattaaccttggagtccatgttacatgatgaggagaga
tatcaagaaactgttcatgacgttccttcactccaggaggtaaaccgcatgatagcgaga
agtgaagaagaagtagaactttttgatcagatggatgaagaatttgactgggaagaagat
atgacaagatacgaccaggttcctaagtggcttcgtgctagttctaaagaagtgaatgat
acaattgctaagaaatcttccaaaaaaagtgctttatacgggggcaacataggagcggaa
tctaatgaactcgagaagaaaaggggaaggactaagggtaaaaagtttcctgtatacaca
gagctagatgatgaaattgatgatttttctgaagctagttcagaagagaggattgggtac
tctggtaatgaagagggagaaataggggatcctgaagatgatgactttatcgccgatgca
cctgctggcaatagtgatcagccagatgatggcacacctgccactgaggtctatgaggat
cctcgacctatagaaggtcatagaccaaatcatatacctgaagaaggaggttcatcaggg
tcatcgtcaggcagtcgaagattaattcaaagggtgtcgccatctatttctgctcagaag
tttggctcactctctgccctggatgcaaggccaggttctgtttcgaataggctgcccaat
gacttggaagaaggggaaatcgctctatctggagattcccttatggaccgccagcattct
ggtagttggattcaagatcgtgacgaaggcgaggatgaacaggttctgcaacctaaaata
aaacgaaagcgaagcatccgaattcggccacgacttgcaacagagaagccagaagagaaa
gccactgagaaattatcgctccggcgtggcgattcctctcatgtatcatcacagatggat
cataaatatgagtctcgagtgaagaatgaaagagaacaaaaattgattgtagagcctaat
tctcagaagttggagaagagcgatccatcactgaaaaccaggaagggttcacattcacgg
aaaaattcaaattctggaaaactgcttgcatcacaaaagcctggtaaagtcaatgtcatg
cctgctccattagaagatgctattgaaaactctagagaaagttgggataacaaagcgatg
tacaaagtgggcaattcaattgataagaagatgtctgatggaattcaacacaggtgcaag
aatgtgataaacaagttccagcggagaatagacagggaaggtcatcaaatagtgccgctt
ctaacagaactctggaagaaaagtgaaactactggttatatgggtgggaacagtcagctt
gatatacgaaagatttaccagcggcttgaaaacttcgaatataatggagtaatggaactt
tgttctgatgtgcaacttatgttaaaaggtgcaattcagtattatggtttctcccacgag
gtgcgaacagaagcaaggaaggtacatgatctgtttttcgatctattgaaggtgacttta
ccagaaattgattttcgagaagccaggagtgctgtctccttctcggggcatgtagcttcc
agttctgccccatcttcaagacaaattcttgctggtcaaggaaaacgacagaaacaagct
aatgaggtagacctggatcatagccactctcagaagccgctttctcgtgtatcccatgct
agtgaagacactcgcaatagaagccacatgcctcagagggagacaagatttggaaacagc
aatagcaataaggagtcaggccagcacgaagattctcgactctttgctcatccgggagag
ctggtcatctgtaaaaagaagaggaaagatagggaaaagtctgttgtgaagtctggaaat
ggatctgctagccaattgtcacctgctagtgttggccgtattagaagcccgggttcaggt
tctgtgtctaaggacactagattggtccagcagacttcccaacagcaaggatggaccaat
tcccctcaacaggcaagtgaaagtcgtagcggaaatattggctgggcaaatcctgtgaaa
agaatgagaacggataccggaaaaaggcgcccaagtcaattgtaa
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integrated database retrieval system