Apium graveolens (celery): 141670478
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Entry
141670478 CDS
T11340
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141670478
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agrv01009
]
141670478
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrv03041
]
141670478
Protein phosphatases and associated proteins [BR:
agrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141670478
Spliceosome [BR:
agrv03041
]
Common components
Common spliceosomal components
SR proteins
141670478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
CoV_nucleocap
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
141670478
NCBI-ProteinID:
XP_074332449
LinkDB
All DBs
Position
7:complement(269632376..269636277)
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AA seq
252 aa
AA seq
DB search
MADSPRKRYSRSPSPYDEQLRLPNSRSRSRSRSWSRPRERSRSRSVSRGRGRPTEVVNPG
NTLYVTGLSTRVTERDLEDHFNKEGKVASCFLVVEPRSRISRGFAFITMNSVEDADRCIK
HLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLARDSSSRGERGDRGDRGGRYRGGSGRD
EYRRSPRRSPYRHGRDYSPPPRRSPYGGRSRRERTRSPPYSPYGGRSRKERTRSPPYSPP
YSPDRTYAHRSR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctccccgcaaaaggtattcgaggtctccttcgccttacgatgaacagctt
aggttgccaaactccaggtccaggtccaggtccaggtcttggtccaggcctcgggaaagg
tctaggtctagatcagtttccagaggccgtggaaggccaactgaggttgttaatcctgga
aacacactttatgttactggcctgtctacgagggttacagagagagaccttgaagatcat
tttaacaaggaaggaaaagttgcttcttgctttcttgttgtggagcctcgttcccgcatc
tcccgtgggttcgctttcataacgatgaacagtgttgaggatgctgaccgttgcattaaa
catctgaatcaatcagttctggaggggcgatacatcactgtagagaggtctcgtagaaaa
cgccccagaacacctacacctggtcactatctcggccttgccagggacagtagctctcgg
ggagaacgtggtgatcgtggtgatcgtggtggtagatatcgaggtggttcgggacgtgat
gagtacaggaggtctccaaggcgttcaccatatcgacatggccgggattactctcctccc
ccaaggcgatctccttatggtggaaggtcaagaagggaaaggactaggtcacctccatat
tctccttatggtggaaggtcaagaaaggaaaggactagatcacctccatattctccacct
tatagtccggacaggacttatgctcatcgaagcagatga
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