Apium graveolens (celery): 141670527
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Entry
141670527 CDS
T11340
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141670527
09123 Folding, sorting and degradation
03018 RNA degradation
141670527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141670527
03041 Spliceosome [BR:
agrv03041
]
141670527
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141670527
mRNA degradation factors
5'-3' decay
Lsm complex
141670527
Spliceosome [BR:
agrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
141670527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
141670527
NCBI-ProteinID:
XP_074332523
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All DBs
Position
7:3644957..3648180
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AA seq
98 aa
AA seq
DB search
MSGGTGLENLVDQIISVVTNDGRNILGILKGFDQATNIILDESHERVYSTKEGVQQHVLG
LYIIRGDNISIVGEVDEELDASLDLSKLRAQPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtactggacttgaaaaccttgtagatcaaatcatttccgtggtaacaaat
gatgggcgcaatatattgggaattttaaaaggatttgatcaggctacaaatataattctt
gatgaatctcatgagcgtgtttattccacaaaggaaggtgttcagcaacatgtcctaggt
ctgtacatcatcaggggagacaacataagcattgttggggaggtagatgaagagctggat
gcaagcctggatctttcgaaattgagagctcaacccctgaagcctgttatacactaa
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integrated database retrieval system