Apium graveolens (celery): 141670724
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Entry
141670724 CDS
T11340
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03030
DNA replication
agrv03420
Nucleotide excision repair
agrv03430
Mismatch repair
agrv03440
Homologous recombination
agrv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141670724
03420 Nucleotide excision repair
141670724
03430 Mismatch repair
141670724
03440 Homologous recombination
141670724
03460 Fanconi anemia pathway
141670724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141670724
03032 DNA replication proteins [BR:
agrv03032
]
141670724
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141670724
Transcription factors [BR:
agrv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141670724
DNA replication proteins [BR:
agrv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141670724
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141670724
MMR (mismatch excision repair)
141670724
DSBR (double strand breaks repair)
HR (homologous recombination)
141670724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PGAP1_3rd
Motif
Other DBs
NCBI-GeneID:
141670724
NCBI-ProteinID:
XP_074332810
LinkDB
All DBs
Position
7:269245631..269249673
Genome browser
AA seq
625 aa
AA seq
DB search
MMKCVSPDAISKIMANPSPDSSSDDFPLIVVQVLDLKLTGNSRFRFVANDGKMKLDGMFP
SSLSSKVNSGNIQNLGLIHIVDYTLNDIPLKNKKYLIVTKCEVVSPPLEAEFVDAVKIED
TGILLKPKQDMDGKSNVQGPEIHLKPKQEMFTKSAAQIFHDQNGNMAPSARMGMSRRVHP
LVSLNPYQGNWTIKVRLTNKGTMRNYKNARGEGCVFNVELTDEDGTQIQATMFNESAKKF
YDRFQLGKAYYISKGTLRVANKQFKTLPNDYEMTLNENSMVEEAIEEGTFIPETKFNFIP
IDQLGPYVNNSELVDVIGVVQSVSPTMSIRRKSNNENIPKRDITIADESKKTVVVSLWND
LATTIGQELLDIADQSPVVAIKSLKVGDFQGVSLSSLSRSVIVVNPETPESKKLKSWYDS
EGKESPMASVGTGLSPSSKSGGRSMYTDRVSISYITSNPSLGEEKPVFFSAKGYISFIKP
DQSMWYRACKTCNKKVTEAIGSGFWCEGCQKNDDQCNLRYIMVAKVADASGEAMLSFFND
QAETVVGCSAQELDNLKSQEGDGTSYQMKLKEVTWVPHLFRVSVVPQEYNNEKRQRITVR
AVAPVDYAAESRFLLEEITKMKSSQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatgtgtgagcccagatgcaatctcaaagattatggcaaacccatctccagat
tcatcttctgatgatttcccactcattgttgttcaagttcttgatcttaagctcactgga
aatagtcgtttcaggtttgtagctaatgatgggaagatgaagcttgatggaatgtttccg
tctagtttgtcatctaaagtcaactctgggaacattcagaacttgggacttattcacatt
gttgattatactcttaatgacattcctttgaaaaataagaagtacctaatagtgacaaaa
tgcgaggttgtgtctcctccacttgaagcggaatttgttgatgctgtgaaaattgaagat
acaggaattcttttgaagcccaaacaggacatggatggcaagagtaatgtgcaagggcct
gaaatccatttaaagccaaagcaagaaatgtttactaaatcagctgcacaaatatttcat
gaccagaatggaaatatggcaccttctgcacgaatgggaatgtcacgaagagtgcatcca
cttgtttccttgaacccgtatcaaggaaactggaccataaaggttcggcttactaacaaa
ggaaccatgcgcaactataagaatgctagaggggaaggctgtgtttttaatgtagagctg
acagatgaagatggtacacaaattcaagcaacaatgttcaatgagtctgcaaagaaattc
tatgacaggtttcaacttgggaaggcctattatatatcaaagggaactctaagagttgct
aacaagcagtttaagacattacctaatgactatgagatgactttgaatgaaaattcaatg
gtggaagaggccattgaagaaggaactttcatccctgaaacaaaatttaattttattccc
attgatcagttggggccatatgtcaataactctgagcttgttgacgttattggtgtggtg
caaagtgtatctcctacaatgagtattcggagaaaaagcaacaatgagaatattccaaag
cgtgacataactattgcagatgagagtaagaagacagttgtggtgtcattgtggaacgat
cttgcaaccactatcggtcaagaactgttggatattgctgatcaatctcctgtagttgct
attaaatccctaaaagttggggactttcaaggtgtgtcgttgtcatcattaagcagaagt
gttattgtggtaaatccagagacacctgaatcaaaaaagttgaaatcctggtatgattct
gaaggcaaagaaagtccaatggcttctgttggcactggcttgagcccctcatccaagagt
ggaggtcgatccatgtacactgatagagtatccatatcatacataacatctaacccatct
ctgggtgaggaaaagcctgtatttttcagtgccaagggttacataagctttatcaagcca
gatcagtcaatgtggtatcgagcttgcaagacatgcaacaagaaagttactgaagccatt
gggtctggattctggtgtgaaggatgccagaagaatgatgatcaatgcaatttgagatat
ataatggttgcaaaagttgctgatgcaagtggtgaagctatgctgtcttttttcaatgat
caagccgaaactgtagttggctgctctgcacaagagcttgacaacttaaaatcacaggaa
ggagatggaacttcttaccaaatgaaactgaaagaagtgacatgggtgcctcacctattc
cgagtgagcgtagtcccgcaggagtacaacaatgagaagcggcagaggataactgtcaga
gctgttgctccggtcgattatgctgctgagtccagatttctgctggaagaaatcactaag
atgaaaagctctcaataa
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