KEGG   Apium graveolens (celery): 141670786
Entry
141670786         CDS       T11340                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like isoform X1
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    141670786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:agrv04121]
    141670786
Enzymes [BR:agrv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     141670786
Ubiquitin system [BR:agrv04121]
 Ubiquitin ligases (E3)
  HECT type E3
   141670786
SSDB
Motif
Pfam: HECT TPR_TRIP12_N ARM_ARMC5
Other DBs
NCBI-GeneID: 141670786
NCBI-ProteinID: XP_074332886
LinkDB
Position
7:215728143..215737486
AA seq 1862 aa
METRSRKRAEAPSSSGVLTRASKRRRFNSPILKSSVAVNMDESSGSGRGRRGKNHVLDKV
KESEKGKEKEFDVRVRGNEIERMLGLKIDSSRNDEEEEDSDDEDEDSEDGVGMLHSNLTS
ASSALQGLLRKLGAGLDDLLPSSAMVAASSSHQSGRLKKILVGLRAEGEEGKQVEALTQL
CEMLSIGTEDSLSTFPVDSFVPVLVGLLGYESNPDIMLLAARAITHLCDVLPSSCSAVVH
YGAVSSFVNRLVAIQYMDLAEQSLQALKKISQEHPTACLRAGALIAVLSYLDFFSTGVQR
VALSSAANICKKLPSDASDFVMDAVPILTNLLQYHDAKVIEHASICLTRITEAFASSSDN
LDQLCNHGLVTQAATLISNTSSGGGQSSLSTSTYTGLVHLLSTCASGSPLGAKTLLLLGI
SGILKNILSGSGLVAGMSAAPALSRPAEQIFEIVNLANELLPPLPEGSISLPASCNIFER
GSHLKNAAASSSEVQVGSTRNNFEFSSREKLLNEQPELLHQFGMDLLPVLIQIYGSSVNG
SVRHKCLSVIGKLMYFSSADMIQSLLSGTNISSFLAGVLAWKDPQVLVPALQIADILMEK
LPGTFFNMFLREGVLHAVDALILTGSTSTVVSQSSLCEMANDSITGSSSRSKRYQRRGDN
STSNVNSTEDSKYSVPTIGSPPNATEIPSVNSNIRMAVSACAKTFKEKYFRMNSGDAGVT
DDLLNLKNLCSRLNAGIQDRTTKLKGASRASGPRIANISDSEEDKFVGLISEMLLELSNG
NGVSTFEFIGSGVVDALLNYFSCGYTTKEKLSEANLSKLRQQAMRRYKSFVALALPSGIN
EKNDVPMSILVQKLQDALSSSERFPVVLSHSARSSSGSVRLSSGLSALAQPFKLRLCRSQ
GEKSLRDYSSNVVLIDPLATLAAIEDFLWPRVQRADSVQKSTASIGSFESGKVPTGAGAS
SLSTATPAYNTRRQSTRSRASIVINENAKKESSQERSTSLSKGKGKAVLKTAQDDAGGPQ
TRHAAHRKAVLDKDAEMKPVEADSSSEDEDMDISPVEIDEALVIEDDDISEEDEDDLDDR
LRGYSLPLCTPDRVHDVKLGDSTDSSPIAPTLTSNQTNAARGSSSRATADKGPDSVNFKS
GNSFGSRGAMSFAAAAMAGLASSNGRGIRGARDRQGRLIFGHNEQPKLIFSAAGKQLNRH
LTIYQAVQRQLVNDEDDDERYNGNDFVSGDGSRLWGDIYTITYQRADSQTDRASVEAVSS
ASSGKSARTGAALHSTVNSSLQQTSLLDSILHVELPCDLEKSNPSYGILALLRVLEGLNQ
LAQRLRIEAATTSFAEGKIPSLDEIIVTGVRVPFEEFINSKLTPKLARQIQDALALCSGS
LPSWCYQLTRACPFLFPFETRRQYFYSTAFGLSRALHRLQQQQGADGHGSMNEREVRVGR
LQRQKVRVSRNRILESAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKV
GLGMWRSDSYNKSAAEGDAIQQKDGKRTSNVQASRDLIQAPLGLFPRPWPPSDGSDVGQL
NKVIEYFRLLGRVIAKALQDGRLLDLPLSTAFYKLVLGQELNLHDILSFDAELGKSLLEL
QALVCRKQYLESTRGQDYKVVDIRFHGASVEDLCLDFTLPGYSNYVMKPGGEMVDINNLE
EYISLAVDATVRGGIFKQLEAFRAGFNQVFDISALQIFSPDELDYLLCGRRELWKMETLV
DHIKFDHGYNAKSPAIVNLLEVMGEFTPEQQRAFCQFVTGAPRLPPGGLAALNPKLTIVR
KHSSTVGNISNVAGVSESADDDLPSVMTCANYLKLPPYSTKEVMCKKLLYAISEGQGSFD
LS
NT seq 5589 nt   +upstreamnt  +downstreamnt
atggaaactcgtagccgtaaaagggcagaggccccttcttcatctggtgtgttaactcgt
gcttctaaacgccgtcgttttaattctccaatcttgaaaagttctgttgctgtgaatatg
gacgagtcttcgggttcgggtcggggtcgacgtggcaagaatcatgttttggacaaggtt
aaggagagtgagaaagggaaagagaaggaatttgatgttagggttagagggaatgaaatt
gagaggatgttggggttaaagatcgattcgagtcgaaacgatgaggaagaggaggacagt
gatgatgaggatgaggatagcgaggatggtgtgggaatgttgcattctaatttgacttct
gctagtagtgcattacaaggtttgttgaggaaattgggagctggattggatgatttgctt
ccctcttctgctatggttgctgcgtcgagttctcatcagagtgggaggttgaagaagatt
ttggttgggttgagagctgagggagaggaagggaagcaagttgaggctttgacccagctt
tgtgagatgctttcgattgggacggaggattcacttagtacatttcccgtggattcgttt
gttcccgtgcttgttgggttgttggggtatgagagtaatcctgatattatgttgcttgca
gctagggcgatcacacatttgtgtgatgtgcttccgtcttcgtgttctgctgttgtgcat
tatggtgcggttagttcttttgttaatagattggtcgcgattcagtatatggatttggct
gaacagtctctacaagctttgaaaaagatatctcaggaacacccaaccgcttgcttacgc
gcaggtgcgttgatagcagtgttgtcgtatctcgacttcttctctaccggagtccagcgc
gtggcattatctagtgctgcaaatatttgtaagaagctgccttcagatgcttcggacttt
gtaatggatgcagttcctatacttactaacctactccagtatcatgatgccaaggttata
gagcatgcttccatctgcttgactaggattaccgaggcttttgcttcatcttctgataat
cttgaccaactgtgcaatcacgggctggttacgcaggcagcgacactgatatctaacact
agttccggaggtggccaatcttctctcagcacatccacatacacgggattggtacacttg
ctttcaacgtgtgcaagcggctcaccgctcggagccaaaaccttgctactcttggggatc
agtggcattcttaaaaatatattatcgggttcaggtcttgtcgcaggcatgtctgcagcc
cctgctttaagcagaccagcggagcagatttttgagattgtgaatctagcaaatgaactt
cttccgccattacctgaaggatctatttctcttcctgcaagctgtaacatatttgaaagg
ggttctcatctaaagaatgctgctgctagcagttctgaagtgcaagtaggttctaccaga
aacaattttgaattttcttctcgtgagaaattgttaaatgaacagccggagcttcttcat
caatttggaatggaccttcttcctgttctaattcagatctatggatctagtgtgaacggt
tctgttcgtcacaagtgcctttctgttattgggaaacttatgtactttagcagtgcagat
atgatccagtccttgttaagtggaacaaatatatcgagctttttagctggggtattagcg
tggaaggatccacaagttttggtgcctgcccttcaaatagcggatattctaatggaaaaa
cttcccggaactttcttcaatatgttcttacgcgaaggtgtattacatgctgtagatgca
ttgatattaactggatctactagtaccgtggtatctcagtcgtcactatgtgagatggca
aatgattccataactgggtcttcatcacgttcaaaacgttaccaaagacgaggtgacaac
tcaacttcaaatgtgaacagcacagaagattccaaatactcagttccaactattgggtca
cctccaaatgcaactgaaattccttctgttaactccaatattcggatggctgtgagtgca
tgtgccaaaactttcaaagaaaaatacttccgcatgaattctggagatgctggggttaca
gatgatcttttaaatttaaagaacctttgctcaaggttgaatgctggtattcaagacagg
actactaaattaaaaggtgcatctagagcttctggtccgcgtattgctaatatttcggat
agcgaagaagataaatttgttgggttaatttccgagatgttactcgagctaagcaatggg
aatggtgtttccacttttgagttcattggtagcggtgtggtggatgctttgctgaactac
ttctcctgtggatacactactaaggagaaattgtcagaagctaatctgtctaagctccga
caacaagcaatgagaaggtataaatcatttgttgcacttgctcttccttcaggcattaat
gaaaaaaatgatgtgccaatgagtatcttagttcagaagcttcaagatgctttgtcttct
tcagagcgttttcctgtcgtacttagccacagtgcaaggtcatctagtggtagtgtccgt
ctctcttctggcttaagtgctctggctcaaccattcaagttgcgtctgtgcagatcacaa
ggagaaaaatctctccgtgattattcttcaaatgttgttctgattgatcctttggcgact
ctagctgcaattgaagacttcctttggcctcgagtacaacgagctgattctgtacagaag
tctacggcgtccattggaagttttgagtctggaaaagttcctactggagctggtgcttcg
tcactatctactgcaacccccgcttataatacccgccgtcagtcaacaagatctagagca
tctattgttatcaatgaaaatgccaagaaggaatcatcacaagagaggagcacaagctta
tctaaagggaagggcaaagctgttttgaagacggctcaagacgatgcaggaggacctcag
acaagacatgctgctcatagaaaagcggttctggataaagatgcagaaatgaaacctgta
gaagcagattcttcttctgaggatgaagatatggacatatctcctgttgaaattgatgag
gctctagtgattgaagatgatgatatctccgaagaggacgaagatgaccttgatgatcga
ttgagaggctattctcttcctctttgcacgcctgacagagtacatgatgtaaaattaggc
gattctactgacagtagtcccattgccccaacacttactagtaaccagacaaacgcagct
cgcggttccagcagcagagctacagcagataagggccctgattctgttaatttcaagagt
gggaattcttttggttcaaggggtgcaatgtcttttgctgctgctgctatggctgggctt
gcatcttcaaatggtagaggtatcaggggagcaagagaccgacagggaagactcatcttt
ggtcataatgagcaacccaaattaattttttcagctgctggtaagcagctaaatagacat
ttgaccatctatcaggctgtacagagacagcttgtcaatgatgaggatgacgatgagaga
tataatggtaatgattttgtttctggtgatggaagcagactgtggggtgatatatatacc
atcacatatcaaagggcagacagccaaactgatcgggcttcagttgaggcagtaagttct
gcatcgtctggtaaatcagcaaggacgggtgcggcacttcattccactgtgaattcgtca
ttgcagcagacatcacttctagatagtattttgcatgtggagcttccttgtgatctagaa
aaaagtaatccatcatatggtatattggcactattacgtgtattagaagggttgaatcaa
ctagcacaacggttacgcattgaggcagcgacaaccagttttgctgaaggaaagatccct
agcttagatgagattatagtgacaggtgtcagggttccctttgaggaatttatcaatagt
aagctcactccgaaattagctcgacagattcaagatgcactcgccctttgtagtgggagc
cttccctcttggtgttaccagttgacaagagcatgcccattcttgtttccttttgagacc
cgacgtcagtacttctattctactgcttttggattgtctcgtgcattgcatcgacttcaa
cagcagcagggtgcagatggtcatggttcaatgaatgaaagagaggtgcgggttggaaga
ttacagaggcaaaaagttcgcgtatctcgaaatcgcattctcgagtctgctgcaaaagtt
atggagatgtattctagtcaaaaggctgttctcgaagtagaatattttggcgaagttggc
actggattaggaccaactttggagttctacacccttttgagtcatgacctacagaaggtt
ggacttggaatgtggagatctgattcctacaataaatcagcagcggaaggtgatgcaatt
caacaaaaagatgggaagaggacaagcaatgttcaggcatctagagatcttattcaagca
cctcttggtttgttcccgcggccttggccaccatctgatggttctgatgttggacaactg
aacaaagtaattgaatactttaggcttcttggtcgtgtgatagccaaggctcttcaagat
ggacggcttctggacttgccattatcaactgcattttataagcttgttcttggtcaagaa
ctaaatttgcatgacattctttcgttcgatgctgaactggggaagtcgctgctggaacta
caagcccttgtttgcaggaaacagtacttagaatcaacaagaggccaagattacaaagta
gttgatatacgcttccatggggcttcagtagaagatctatgtctggattttacacttcct
ggatattctaattatgttatgaaaccgggcggtgagatggttgatataaataatttggaa
gagtatatttcccttgctgttgatgctactgtaagaggagggatctttaaacagctggag
gcatttagagctggctttaatcaggtctttgacatctcagctctacaaatattttctcca
gacgaattggactatttgctttgcggccgtagagagttgtggaagatggagacacttgta
gatcacattaagtttgatcatggctataatgcaaagagccctgcaattgtcaatttgctt
gaggttatgggggaatttaccccagagcagcagcgggctttctgtcaatttgtgacaggt
gcacctcggcttccccctggtggtttggcagcccttaatccaaagctaacgatcgtgaga
aagcattcatcaactgttgggaacatatctaatgtggccggcgtgtcagaatcggcagat
gatgatttgccaagtgtgatgacatgtgctaattacttgaagcttcctccttattctacc
aaggaagtcatgtgcaagaaactgctatatgctataagtgaaggacagggatcttttgat
ttgtcatga

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