KEGG   Apium graveolens (celery): 141671242
Entry
141671242         CDS       T11340                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
agrv  Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:agrv04131]
    141671242
   04121 Ubiquitin system [BR:agrv04121]
    141671242
Enzymes [BR:agrv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     141671242
Membrane trafficking [BR:agrv04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    141671242
Ubiquitin system [BR:agrv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    141671242
SSDB
Motif
Pfam: zf-RING_2 Zn_ribbon_19 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-RING_UBOX Zf_IFT144_1st zf-C3HC4_3 zf-ANAPC11 Anti-TRAP zf-RING-like zf-RING_5 zf-RING_10 zf-Nse zf-HC5HC2H DZR FAR1_N VPS18_RING_C zf-RING_16
Other DBs
NCBI-GeneID: 141671242
NCBI-ProteinID: XP_074333502
LinkDB
Position
7
AA seq 361 aa
MSTLSGAATATTRYFCHQCNSTVSIPPQSPSSELVCPNCNGGFLEEFDESSSTNALPILN
APSLFPLASQSNDLFNLLRGGNRWDHRDQFDPLSFFVTYLSTLRAGGANIQFVVNNNNNN
NNNDNNENENNENENENAGRNFYSDRLFDPFGLRVPFNLGDYVVGPGLEQLIQQLSENDP
NRHGPPPAAKSAVEGLKKVEIGDEMSDGDYAQCAVCMEAFEVGVEAKEMPCRHLFHSDCI
VPWLEMHNSCPVCRFELPTDDEDYESRKRGGVEGSGGGIGQASGGMVQLSGGGGRPLALG
IGGSLGNVYSNPRMMERRFRIQLPMLIRGGEETSNSGTGNETGNETAGGSNTDSQAADDV
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtccaccctctccggcgcggccaccgccaccacccggtacttctgccaccaatgcaat
tccacggtgtctataccaccgcaatctccctcctctgaactcgtttgtcctaattgtaat
ggcggttttctcgaagaattcgacgaatcttcaagcaccaatgctcttcctattctcaat
gcgcctagtttgttcccgctggcgtctcagagtaatgacttgttcaatctcttacgagga
ggaaataggtgggatcatcgcgatcagtttgatcctttgtcgtttttcgtgacttatttg
agtacattgcgcgccggtggcgccaatatacaattcgtcgtaaataataacaacaacaat
aataataatgataataatgagaatgagaataatgagaatgagaatgagaatgctggtcgt
aatttttatagtgataggctgtttgatccgtttggactacgtgttccgtttaatttagga
gattatgttgttggaccaggactagaacaattgatacagcagttatcggagaatgatccg
aataggcacggaccgcctcctgctgctaaatcagcggtggaagggcttaaaaaggtcgag
attggggatgagatgagcgatggtgattatgcgcaatgtgcagtctgtatggaggctttc
gaggtcggtgtggaggccaaggagatgccgtgtaggcatttgtttcattcggattgtatt
gtcccgtggttggagatgcataattcttgtccggtttgtcggtttgagttaccgacagat
gatgaggattacgagagcaggaagcgtggcggtgtggaggggagtggaggtgggatagga
caagcgagcggtggaatggtacaattgagtggaggtggagggaggccgttggctctcggg
atcggagggtctttaggtaatgtttatagtaatccgaggatgatggagaggaggtttagg
atacagttgccgatgttgattagaggcggagaggaaacaagcaatagcggaactggaaat
gagacaggaaatgagacagccggaggttctaacaccgatagccaggctgcggatgatgtt
gattaa

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