Apium graveolens (celery): 141671712
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Entry
141671712 CDS
T11340
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
agrv Apium graveolens (celery)
Pathway
agrv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
141671712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141671712
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
141671712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
141671712
NCBI-ProteinID:
XP_074334128
LinkDB
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Position
7:complement(187932227..187942379)
AA seq
979 aa
AA seq
DB search
MRTTRNQAKRQLQSTVNSKCSVWAGEEETKRPRLDLGKQKCVDSGEDNDTLTDISHEAVG
KFLKRVNRHGAKGSKLQESFLNRCDAINKLESGLKDKQTADECSNRNITESSSQEKADGV
AQQVTDDDDQMDEPDWEDGQVNNFSSGNDHKEGNITIEFDASPDTAKRKAICRASAEDKE
RAELVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLVPSQFLKISETSKLTARALAPLVN
WFRKYFHVRLLSNTERSFESALALALETQEGTAEEVAALSVALFRALNLTTRFVSVLDVA
SLKPCVEKNESVTRKARRTSRGIFNSSTLMVATPDPVSGFPSKELAYADMDNICETSGRH
SFKNNNRKTESITSQARDSPPANQSNDYEAQNDMSDVGSTKQYKWPKRIGDLEFEMQLEM
AKAATASRNGNTDRESCEKKLNFNRIKGIKTPSGPYPFPSRIPLKDMRRVRSVEPSTSQG
ISVAIGSRKVGAPLYWAEVYCSGENLTGKWVHVDAVNAIIDGEQKVEAAIAACKMPLRYS
VAFAGDGAKDVTRRYCMKWYKIASERINMKWWDAVLAPLKELEMIATDNMLKRHEGLNEH
ERTKTTGMLDQSMLDCASGRAKSMAECSIENSYGVSRSCLEDIELETRALTEPLPTNQQA
YKNHPLYALERWLTKCQILHPRGPILGFCSSHPVYPRTCVQVLRTKERWLREGLQLKANE
LPAKVLKRSPKQNKELASEADDYDEGDNCGQDTSLYGEWQTEPLQLPHAVDGIVPRNERG
QVDVWSEKCLPPGTVHLRFPGLVPIAKRLEIDFAPAMVGFEFRNGRSVPVYEGIVVCTEF
KDAILEVYVKEEERRYAEERRRNELQAISRWYQLLSSIVTRQRLKNRYGDGSASQSVTYA
QDPNVRSDARVSGDKDAAKQTSKSQPRNLQVRKENAQQSEIADEHEHVFLMDDQTTGDEK
SSTRIKRCHCGFYIEVEVL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcggacaacaagaaaccaagccaagcgacaacttcaatcaacagtgaacagcaaatgt
tccgtttgggcaggtgaggaagaaactaaaaggcctcgacttgatttgggaaagcaaaag
tgtgttgattctggcgaagataatgatacccttactgacatatcacacgaggctgttgga
aaatttctaaagagagttaatcgacatggtgcaaaagggtcgaaattgcaagagagtttt
cttaatcgatgtgatgcaataaacaagttggagagtgggttgaaggacaaacaaacagcg
gatgaatgtagtaatagaaatataaccgaaagcagttcacaagaaaaggcagatggtgtt
gctcagcaggttactgatgatgatgatcagatggatgaacctgactgggaagatggacag
gttaacaatttcagctctggaaacgatcataaagaaggcaatattacgattgaatttgat
gcgtcacctgatacagcgaagcggaaggctatttgtcgagcttctgcggaagataaggaa
cgagctgagcttgtgcataaagttcatctgctttgtttactaggacggggaaggttaatt
gaccgcgcctgtaatgatcctctaattcaggctgctttactctcactagtaccaagccag
tttttgaagatatcagagacctcaaaacttacagcaagagctttggctcctctggttaat
tggttccgtaaatactttcacgtcagacttctaagcaatacagaaagatcatttgaatca
gctttagcattagctcttgagacacaagaaggcactgcagaggaggttgctgcattgtct
gtggcactttttagagctttgaacctcacaacccggtttgtttctgttttggatgttgct
tctttaaaaccttgtgttgaaaaaaatgaatccgtaaccagaaaagctagaagaacaagc
agagggatattcaactcttcaacattgatggtggctactccagatccggtctctggtttt
ccttctaaagaacttgcttatgctgacatggataatatatgtgaaacatctggtagacat
tcttttaaaaataacaacagaaagacagaaagtataacatctcaagctagagattctcct
cctgctaaccagtcgaatgattatgaagcacagaatgatatgtctgatgtgggctctaca
aagcaatacaagtggccaaagaggataggcgatcttgagtttgaaatgcagctggaaatg
gctaaagctgccacagcatctagaaatggtaacactgatagagagtcatgtgaaaagaag
ttgaatttcaaccgcataaaaggcattaaaaccccctctggaccctacccatttccatcc
cgaataccattaaaagatatgagaagagttagaagtgtagaaccctcaacttctcaagga
atttctgttgccattggatccaggaaagtaggagctcctttgtactgggcggaagtgtac
tgtagcggggagaacttgacaggaaaatgggttcatgttgatgctgtcaatgctattatc
gatggggagcagaaagtagaagctgcaattgctgcatgtaaaatgcctttgagatattct
gttgcttttgcaggagatggagctaaagatgtgacacgcaggtattgtatgaagtggtac
aagatagcatcagagagaataaatatgaaatggtgggacgctgtgttagcacctttgaaa
gagttggagatgatagcaactgacaatatgctcaagagacatgagggtttaaatgagcat
gaaaggacaaaaacaactggaatgctggatcagtccatgcttgactgtgcatcaggccgt
gccaaatctatggcagagtgttcgatagagaattcatatggtgtttccaggagctgcctt
gaagatattgagttggaaactagagcattaactgagcctcttccgactaatcaacaggcc
tataaaaatcatccattgtatgctcttgaaaggtggcttaccaaatgtcagatacttcac
cccagaggtcctatattaggtttttgttctagtcatcctgtttatcctcgaacatgtgtt
caagtactccgtacaaaagaaagatggctgcgtgaagggctgcagctgaaagccaatgaa
cttccagcgaaggtattgaagcgttcacctaagcagaacaaagagctagcttctgaagca
gatgattatgacgagggagacaactgtggacaagatacttctctttatggggagtggcaa
acagaaccactgcaactgcctcatgctgtagatgggattgtaccaaggaatgaacgtggt
caagtggatgtttggtctgaaaagtgtcttcccccaggaacagtgcacctgaggtttcca
ggattggtcccgattgcaaagagacttgaaattgattttgcacctgctatggttggtttt
gagtttcggaatggtcgatccgtccctgtgtatgaaggcattgtcgtctgcactgaattt
aaggatgcaattttggaggtgtacgtaaaagaagaggagagaaggtatgcggaagaaaga
agaaggaacgaattacaagctatttctagatggtatcaactgctttcatccattgtaacc
aggcaaaggttgaaaaatcgctatggtgatggctctgcatcacagtctgtaacttacgca
caagatcccaatgtcagatccgatgcacgggttagtggtgataaagatgctgccaagcaa
acatccaagtcccagccaagaaatctgcaggtcaggaaagagaatgctcaacaatcagaa
attgctgatgaacatgaacatgtatttctgatggatgatcagacgaccggtgatgaaaaa
agttccacgagaataaagcgttgtcactgtggattttatattgaagtagaggtgttatag
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