Apium graveolens (celery): 141671844
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Entry
141671844 CDS
T11340
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141671844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141671844
04121 Ubiquitin system [BR:
agrv04121
]
141671844
03036 Chromosome and associated proteins [BR:
agrv03036
]
141671844
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141671844
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
141671844
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141671844
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
141671844
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
141671844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_6
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
PHD_NSD
zf-RING_5
RTT107_BRCT_5
PTCB-BRCT
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
141671844
NCBI-ProteinID:
XP_074334329
LinkDB
All DBs
Position
7:2525263..2531799
Genome browser
AA seq
647 aa
AA seq
DB search
MAEECQSWRLLNPWLLHLQKLALELKCPLCLELLSQPVLLPCDHIFCNCCVKTSTKFGSE
CPSCKSKYGDQEVRSAPFMESLVSIYRSLDATSVNTLFQAVPCDAAKKLNMSPGSVKINF
VDGMKTELNQVAADGNSSSGTFFPLLAKKCSHDLLNGSAEEEKMLNENPIKSALSGGIQA
KHVELTGLDASVFNAGGRVTNFQSPVKDGSVKHEASKVEEIDMNQMGQLSPACTDSLGDI
NDNSSDPASCRDAKRQKKSNPEDTGGVCAFCHSSEVTDETGEMIHYANGKLVVGSLKPFS
NGIHVHKMCIDWTPQVYYEGDYIRNLESELARASKLKCSMCGLKGAGLGCFMKSCRRSYH
VPCAIKTSDCRWDFDDFLMTCPVHKSVKFPSERSKFRKEVIHKAEPVAAPIAPKQVNFWA
SSLTGPKDWVLCGSALSTEEKCYLAKFASTCGATISRSWNPNVTHVIASTDANGAYTRTL
KVLMAILHGRWVVTMDWIKACKEMNRPEDEEKYEAGLDNHGCWGGPKSGRLRCSQNAPTL
FSGINFYFSGDFLPAYKDDLLNLVTTAGGFVIKNKEQLAALSSPVQGSSTTVVVYNVDPL
QYMGKNESVLLQRLRTAEDLATEFGFRVLKHTWILESVAACKLQAYY
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaatgtcaatcttggagactactgaatccatggctccttcaccttcagaaa
ctcgctcttgagctcaaatgccctctttgccttgagttgctgagccagcctgtgttgcta
ccctgtgaccatatcttttgcaattgctgtgttaagacttctactaagtttggatctgaa
tgcccttcatgtaaatccaaatacggggatcaagaggtgaggtctgcacctttcatggaa
agtctagtgagtatctacagaagcttggatgctacttctgtaaacactctctttcaagcc
gttccttgtgatgctgcaaagaagttgaatatgtctcctggctcggtcaagataaacttt
gttgatggcatgaagaccgagcttaaccaagtggctgcagatgggaattccagcagtggg
acctttttccctctattagctaagaagtgcagtcatgatttgctcaatggttctgctgaa
gaggagaaaatgttaaacgagaaccccatcaaaagtgcactctccggaggtattcaagcc
aaacacgtggagttgactggtcttgatgcatcagtctttaatgctggaggcagggttacg
aattttcagtcgcctgttaaagatggaagtgtgaagcatgaagcgagtaaagtggaggaa
atagacatgaatcagatgggacaactttcacctgcttgcacagattcgttgggtgatatt
aatgataacagttctgatccagcgagctgccgggatgccaagaggcagaagaaatcaaat
cctgaagatacaggtggagtttgtgcattttgccattcttcagaggtcacagatgaaact
ggggagatgatacattatgctaatgggaaattagttgttgggagtttaaaacctttctcc
aatggaattcatgttcacaagatgtgcattgattggacacctcaagtatactatgaaggt
gactatataagaaatttagagtcagaattagccagggcttcaaagctaaaatgcagtatg
tgtgggttaaaaggagctggacttggctgctttatgaagtcctgcaggagaagttatcat
gtaccttgtgcaataaaaacctcagattgcagatgggacttcgatgactttttaatgaca
tgtccagttcacaaatctgtcaagtttccaagcgaaaggtctaaatttagaaaggaagtt
attcataaagccgaacccgttgcagcaccaatagcacctaagcaggtaaatttctgggca
tcgtcgcttactggaccaaaagattgggtactttgtggatctgctttgtctactgaggag
aagtgttatctagcaaagtttgcaagcacttgtggtgccactatctcaaggtcttggaat
ccaaatgtcacccacgtgattgcctcgactgatgctaatggtgcttatacaaggacttta
aaagttctcatggctattttacatggaagatgggtcgttacaatggactggatcaaagct
tgtaaggaaatgaacagaccagaagatgaagaaaagtatgaggctggcctagacaatcat
ggatgttggggtggtcccaaatcaggcaggcttcgttgctcacaaaatgcacccacgctt
ttcagtggcatcaatttctactttagtggtgattttttgccagcatacaaggatgacctc
ttaaatttggttacaacagctggtggttttgtaattaagaacaaggaacaattagctgct
ttaagtagtcctgtgcagggatcttcgacaactgtagttgtatacaatgttgatccatta
cagtacatgggcaaaaacgaatctgtcctgttgcagaggttaagaacggcagaggatttg
gcaactgaatttggcttccgggttcttaaacatacttggattttggaatctgttgcagca
tgtaagttgcaggcctattattaa
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