Apium graveolens (celery): 141671942
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Entry
141671942 CDS
T11340
Name
(RefSeq) uncharacterized protein LOC141671942
KO
K12849
pre-mRNA-splicing factor 38A
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141671942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrv03041
]
141671942
Spliceosome [BR:
agrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
141671942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
HIND
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
141671942
NCBI-ProteinID:
XP_074334498
LinkDB
All DBs
Position
7
Genome browser
AA seq
384 aa
AA seq
DB search
MANRTDPAAKNIKGTNPQNLIEKILRNKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
HGGNRRPTPFMCLVTKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDVYRYL
EPLYNDYRKLKRQLADGSFALTHMDEVIDELLTKDYSCDIALPRMKKRWTIETIGALEPR
KSALEDDFEEEEEKDEDDHIMADVEDADHDKAHYRGRSPARERDRERGRDSHRYRDRDYD
REYDRDYDRDRGRGRDRDRDRYRLRDEKDYGRDRERERDREGRERDRRDRDRVRRRSHSR
SRSRSRDRKDRDGEERRRRHRGSASPRKHGDGLEDGTRDDVKKKERKEKKEKKEKKDDGT
DHPDPEIAEANRLRASLGLKPLRM
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggacccggcggcgaagaacataaagggcacgaatccccaaaaccta
attgagaagattcttcgaaacaagatttaccagaacacgtattggaaggagcagtgtttt
ggattgactgctgaaacgctggttgataaggcgatggagctggatcatattggtggtact
catggtggtaatcggaggccgacgccgtttatgtgtttggttacgaagatgcttcagatt
cagccggagaaggatattgttgttgagtttattaaaaatgaggattataagtatgtaaga
gttcttggagctttttatttgaggcttactgggactgatattgatgtttaccgttacttg
gagcctttgtacaatgactatcgaaaattgaagcgtcaattagctgacggaagttttgct
ctgacacatatggatgaggttattgatgagcttttgacgaaagattattcttgtgatatt
gctctgccgcgtatgaagaaaagatggactatcgaaactattggtgcactagaacctaga
aaaagtgcacttgaagatgactttgaggaggaagaggaaaaagacgaggatgatcatatc
atggctgatgtagaagatgcggatcatgacaaggctcattaccgtggacgcagccctgcc
agggaaagagacagagaaagaggacgagacagtcatagatacagggaccgagattatgat
cgagaatatgatcgagattatgatagagaccgtggaagagggcgtgacagagacagggac
cgttatcgcctgagagatgaaaaggactatggccgagatagggagagagaaagggataga
gaaggtagagagcgagatagacgagatagggaccgtgttaggcggaggagtcattcaaga
agccgaagtagaagtagggatcggaaagatcgtgatggagaagaacgccgtaggagacat
cgtggaagtgctagcccaagaaagcatggtgatggtcttgaagatggtacccgtgatgac
gtgaagaagaaggaaaggaaagagaagaaggagaaaaaggagaagaaggatgatggaacg
gaccacccagatccagaaattgcggaagcaaacaggcttagggcatctcttgggttaaaa
ccgttgagaatgtga
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