Apium graveolens (celery): 141672032
Help
Entry
141672032 CDS
T11340
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03030
DNA replication
agrv03420
Nucleotide excision repair
agrv03430
Mismatch repair
agrv03440
Homologous recombination
agrv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141672032
03420 Nucleotide excision repair
141672032
03430 Mismatch repair
141672032
03440 Homologous recombination
141672032
03460 Fanconi anemia pathway
141672032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141672032
03032 DNA replication proteins [BR:
agrv03032
]
141672032
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141672032
Transcription factors [BR:
agrv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141672032
DNA replication proteins [BR:
agrv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141672032
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141672032
MMR (mismatch excision repair)
141672032
DSBR (double strand breaks repair)
HR (homologous recombination)
141672032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_3
zf-CCHC_2
CDC24_OB3
DUF223
Motif
Other DBs
NCBI-GeneID:
141672032
NCBI-ProteinID:
XP_074334616
LinkDB
All DBs
Position
7:complement(32566192..32573265)
Genome browser
AA seq
992 aa
AA seq
DB search
MAVNLSAGSVHMICNTDSKHVDIFPVLQVQDVRIVQTANSAAERYRLLLSDGIFTVQGML
ATQNNDLVKTNRIVKGSVVQLNEFVCNRIQTRVIIIIVKLDIVLEQCETIGDPKPFPPIG
DSATLPTSKPSPASTISHTTPSNPQYQSDNSFSGGLMQENVGMGSYMQAPGQGRSSGPPL
YSNSASKVESGQCNQTSAFGYSNTESAMGLSRSPSNNHVHPIQPAYAQIPPMYGNRGPIA
KNGAPPRIIPIAALNPYQGRWTIKARVTAKGDLRQYSNQRGEGKVFSFDLLDSDGGEIRA
TCFNAAADQFYHQIEDGKVYLISKGTLKPAQRNFNHLPNDHEIMLDSSSTVQPCFEGEQS
IPQQRFQFRPINEIEGIESNTIIDVIGVLCSIGVPTPVMRKNGTETLKRSLQIKDMSGRS
VEVTLWGNFCNAEGQTLQSICDSGVYPVLAVKSAKVNDFSGKTVGTIPTSKVIIEPDIPE
AHKLKAWMENDGKNAPVSSISREASIGRQDVRKTISQIKDENLGTSEKPDWITVTATLSY
LKTDNFCYTACPLKIGERQCSKKVINNGDGTWRCERCDQSVDECDYRYILQFQIQDHTGL
TWVTGFQEIGEEIFGTSAKELYTLKYEEQDDEKFSVFVRKALFSKYLFKLKVKEETFSDE
QRVKSTVVKVDKLDFISETRSLLDSLNKLQGNDSVSVSLKSENSVLNTATNNAAYGSVGI
KESVQQNVNYMGNISTAGQGIGFPASQVGQFGNQNVGSSLAPTGPTTLYTKCSTCGHMGH
SYNQCPAALESQEHSFGGGFSRTISAGSVSAGGGGSSGGECYKCHQPGHWASNCPNAGSA
VPGYGSGKISTSAGGGGSGGGANECYKCHQPGHWASNCPNAGSAVSGYGSGNISTAGGGG
SGGGECFKCHQHGHWASSCPNAGSALPAYGTSNISTSAGGGGSGGGECFKCHQPGHWAKD
CPGAGGSTAGYGSGSVSAGRFGSASNQYVGGY
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaatttatcagcaggttcagttcatatgatatgtaacacagactcaaaacat
gtggatatattcccagtgcttcaagttcaagatgtgaggattgttcagactgctaattca
gctgctgagagatacagattgttgctttctgatgggatttttactgttcaaggcatgctt
gctactcagaacaatgatttggtcaagactaataggattgttaaaggctctgttgtgcag
ttgaatgagtttgtttgtaaccgtattcagaccagagtgataattataattgtcaaactg
gatattgtactagagcagtgtgaaacaattggcgatccaaaaccatttccaccaataggt
gacagcgcaactttaccaacatcaaaaccttccccagcttctaccataagtcacacgact
cctagtaatcctcaataccaaagtgataattcattcagtggtggcttaatgcaggaaaat
gtgggtatgggaagttatatgcaggctcctggacaaggaaggagttcaggcccgccttta
tatagtaactcagcaagcaaagtagaatcaggacaatgtaatcaaacttcagcctttggg
tactcaaacacagagtctgctatgggactttcacgatcaccgtcaaataatcacgtgcat
cctattcagccagcatatgctcagatacctccaatgtatggaaacagaggaccaatagca
aagaatggagcacctccaaggattattcctattgcagctcttaatccatatcaaggtagg
tggacaattaaagccagagtgacagcaaagggagatcttagacaatacagtaatcagcga
ggtgaagggaaggtattttcttttgatcttcttgattctgatggtggagagatacgtgca
acctgctttaatgctgcagcagaccagttttaccaccagattgaggacggaaaagtatat
ctaatttcaaaaggaacgctgaaaccagctcaaagaaattttaatcatctcccaaatgat
catgaaattatgttagacagctcttcgacagtgcagccttgttttgaaggtgaacagtcg
ataccacaacaacgttttcaatttcgtcccattaatgaaattgaaggtatagaaagtaat
accattattgatgtcattggtgtgctttgctcgatcggtgtgcctaccccggtaatgagg
aaaaatggtactgaaacgctgaagagatccctccaaattaaagatatgtctggaagaagt
gttgaagtaactttgtggggaaatttttgcaatgcagaaggacaaacactgcaaagcatt
tgtgattcaggggtatatcctgttttggctgtgaaatctgctaaagtgaatgactttagt
gggaagactgttgggacaatacctactagtaaggtgattatagaaccagatattcccgag
gctcacaaattaaaagcatggatggagaatgatgggaagaatgctccggtatcttctatt
tccagggaggcatctattggaaggcaagatgttaggaagacaatatcccaaattaaagac
gaaaatttagggacttctgagaagccagattggataacagtaactgctactctatcgtat
cttaaaacagacaatttctgctatactgcatgtccccttaagatcggtgaacgacagtgc
agcaaaaaagttataaacaatggagatggaacatggcgttgtgagaggtgtgatcagtct
gttgatgaatgtgattatagatatatactccagtttcagatacaggaccatactggccta
acatgggtgactggatttcaggaaattggagaggaaatctttggaacctctgcaaaagag
ttgtatacattgaagtacgaggagcaagatgatgaaaaattttcagtattcgtccgcaag
gctctcttcagcaaatatttgttcaagttgaaagtgaaggaagagacatttagtgatgaa
cagcgggtgaagtccactgtggtcaaagttgataaactagattttatatcggagactaga
agtctcttggattcacttaataagcttcaagggaatgactcagtttcagtatctttgaag
tctgaaaattctgttttgaacactgcaacgaataatgctgcatatggtagtgttggaatt
aaggagtctgtacagcaaaatgtcaactatatgggaaatattagtactgctggtcaaggg
atcgggtttccggcaagtcaagtaggtcagtttgggaaccaaaatgttggttctagcctt
gcaccaactgggccgactactctctatacgaagtgtagtacctgtggtcatatgggtcac
agctataatcaatgtccagctgctttggaaagtcaagaacattcatttggtggaggtttt
agtaggacaatttctgctggcagcgtcagtgctggaggtggtggtagtagtggtggcgag
tgttacaaatgtcatcaacctggtcactgggcaagtaactgtcccaatgctggaagtgca
gttcctggttatggaagcggcaaaatttctacttctgctggcggtggtggtagcggtggt
ggtgcaaatgagtgttacaaatgtcatcaacctggtcactgggcaagtaattgtcccaat
gctgggagtgcagtttctggttatggaagtggcaatatttctactgctggcggtggtggt
agcggtggtggtgagtgttttaaatgtcatcaacatggtcactgggcaagtagttgtccc
aatgctgggagtgcacttcctgcttatggaaccagcaatatttctacttctgctggcggc
ggtggcagcggtggtggcgagtgttttaaatgtcatcaacctggtcactgggcaaaagat
tgtcccggtgcagggggttcaactgctggttatggaagtggcagtgtttcagctggaaga
ttcgggagtgcttctaaccaatatgtgggtggctactga
DBGET
integrated database retrieval system
