Apium graveolens (celery): 141672219
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Entry
141672219 CDS
T11340
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agrv01009
]
141672219
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141672219
Enzymes [BR:
agrv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141672219
Protein phosphatases and associated proteins [BR:
agrv01009
]
HAD phosphatases
Fcp/Scp phosphatases
141672219
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141672219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
141672219
NCBI-ProteinID:
XP_074334868
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Position
1:179296147..179304216
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AA seq
457 aa
AA seq
DB search
MSVVSDSPVHSSSSGDDFAAFLDAELDSTSDTSPEPGDDDDENENDYDSELFSTKKQKVE
LSDNVVVSYGSTSRGAEEKLVASIKEDICTHPGVIGGMCIRCGQKTEEGQSGVAFGYIHK
DLRLANDEIARLRNNDLKNLFRHKKLNLVLDLDHTLLNSSQFRHITPEEEYLRVPPDSLP
DELKGNLFRLDFMHMMTKLRPFVRTFLKEASKLFEMYIYTMGERAYALEMARLLDPENIY
FNSKVIAQGDCTQRHQKGLDVVVGQDSAVLILDDTEQVWSKHKENLILMERYHYFVSSYR
QFRFNCKSRSELKCDESEDDGALAAVLEVLKRVHSIFFDTEQGGDINKKDVRQVLKTVRK
EVLKDCKLLFTKVIPIEYRAESHHFWKMAEQLGATCSTEMDPSVTHVVSLDKGTEKSRWA
VRENKFLVHPSWIEAANYLWRKHPEEKFPVDEVKQTK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgtaagtgattctcctgtgcactcgtcgagcagtggcgatgacttcgctgct
tttctcgatgcggagttggattctacttccgatacgtctcccgagcctggcgatgatgat
gatgaaaatgagaatgattatgactcggagttgtttagtaccaaaaagcagaaggtggag
ttatcggacaatgttgtagtatcttatggttcaacatcacgcggagctgaagaaaaattg
gtagcatctatcaaagaggatatttgcacgcatcctggtgttattggaggaatgtgtata
cggtgtggacaaaagactgaagagggacagtctggggttgcatttggttatatccacaag
gatttgagacttgctaatgatgaaattgctcgattgcgaaacaacgatctgaagaacttg
ttccgacataaaaagcttaatttggttcttgatctggaccacacacttctcaactcatcc
cagtttaggcatattacgccagaagaagaatacctaagagtgccacccgattctctgcca
gatgaacttaagggaaatctcttcagattagattttatgcacatgatgaccaaattgagg
ccttttgtgcgtacatttttaaaagaagcaagtaagttgttcgaaatgtacatatacaca
atgggtgaacgagcctacgccttagaaatggctaggctgcttgacccagaaaatatctac
ttcaattctaaagtgattgcgcaaggtgattgcacccaaagacatcagaagggtcttgat
gtggttgtggggcaagatagtgctgttttgatccttgacgatacagaacaggtttggtcg
aagcacaaagaaaacctcatattgatggagagatatcattactttgtttcaagttatcga
caattccgctttaattgcaaatcacggtctgaactcaaatgtgatgaaagtgaggatgat
ggagcgcttgctgctgttcttgaagttctcaaacgagtccactcaattttttttgataca
gaacaggggggcgatattaataagaaggatgttagacaggtgttgaaaactgttcgaaag
gaagttctgaaggactgtaaactccttttcaccaaggttatcccgattgaatatcgtgct
gagagtcaccacttttggaagatggcagagcaattgggagccacatgctcaacggaaatg
gatccctcggtgacgcatgttgtctccttggacaaaggaacagagaaatctcgatgggct
gttcgggagaataagttccttgttcatccaagttggatagaagctgccaactatctttgg
cgtaagcatccagaagaaaagtttcctgttgatgaagtgaagcagacaaaatga
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