Apium graveolens (celery): 141672249
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Entry
141672249 CDS
T11340
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
agrv Apium graveolens (celery)
Pathway
agrv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141672249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141672249
03036 Chromosome and associated proteins [BR:
agrv03036
]
141672249
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141672249
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141672249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
141672249
NCBI-ProteinID:
XP_074334906
LinkDB
All DBs
Position
7:complement(9957150..9964865)
Genome browser
AA seq
699 aa
AA seq
DB search
MPGVATNSDELSLIPYSQNNSHIIPIRHTLKPPISRLSIAWARGSSLRVSVLRQPESDDE
PGGQVVEVKLGVDEADIYDAQWRRIAYGSVTPFAVLQSRKNPIWDAYNADLSDVIEYSKE
INSLLGNYKVLPDPAIEDPRTVVQRVDEPTFSKAAWELMEIFYANKQSDGWIPERLVDWL
SDYDKLIHREQPTIYSRLVDFQTELVNLQAVEKDPKYWDVLSAALAVGWLDIVVKLLRLH
SSYQHNQIASRETENGLVETVVVLVSKMPRLRPNLSAGKLGECYETKPDFVKAWEKWRGQ
ITKLDCSSFWLQCEHQDTREGLKRMLQIMLGNASVLSAATFHWVELFIGHFLYIRPFTVG
MESMYSLAQKCMQLKPVSSPHKLMELLNGILGENTEVVLAECSRSFGSWMITHAIELLTA
GSTQADILLHEERNHLGGICIEELHRLVYAQVLSSHALTWQIAPIYLASCMKQGMGLLEI
LLYKQPVGHNQILLKNIEICRMYELDNVGSNAMKIAGVHHWKHGKKGSGVFWLQQAQDEF
RLNRIAQQLFDFVGKSVSDESFKQWEGLIELLGSQSKAAGGLDFLHKYRDFKRSLQQVTD
MTSIDAAQKASEALILLMKNPSTPQRFWLSLLHDAVQLLNWKERTLLNVPQTNLLLNKLQ
ELSMARLRPDFIEADLPPQALSSVRLALATNLGRAILEE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgttgcaacaaattccgacgaactctcactcatcccttactcacaaaacaac
tcgcacataatcccaatccgccacactctaaaacccccaatttcacgcctctcaattgcg
tgggcgcgtggtagctccctgcgcgtctccgttctccggcaacctgagtccgatgatgag
cctggaggacaagtagtggaagtgaagctcggtgttgatgaagcggatatatatgacgcg
cagtggaggagaattgcttatggctctgttacgcctttcgctgtgcttcaaagtcggaaa
aacccgatttgggatgcgtataatgctgacttgtcagatgtaattgagtacagcaaggag
ataaactcattgcttgggaattataaagtgctgcctgatccggctattgaagatccgaga
acagttgtacagagggttgacgagccaacattctcgaaagctgcttgggaactgatggag
atattctatgctaataagcaatctgatggttggatacctgaacgccttgttgattggcta
tctgattacgacaagcttatccacagagagcaaccaacaatctattccagacttgtagat
tttcaaactgagctagttaatttacaggcagttgagaaggatcccaagtattgggacgta
ctatcggcagcattggctgtcggctggctagatattgtggtgaaattgttgcgtctgcac
agttcttatcaacacaatcagatagcgagtcgtgagacagagaatggattggtagagact
gtagttgttcttgtctctaaaatgccccgcctgcgccctaatctatcagcaggcaaatta
ggcgaatgctatgaaactaagcctgattttgtaaaggcgtgggagaaatggcgaggacaa
atcacaaagctggattgcagttccttttggcttcaatgcgagcatcaggatacaagggag
ggtctgaaaagaatgttgcagattatgctgggtaatgctagtgtcctgtctgctgcaaca
tttcattgggtagagctatttatcggacacttcctgtacatcagaccattcactgtgggt
atggaaagtatgtatagtctagctcagaaatgcatgcagttgaaaccagtatccagtccc
cataaattaatggaactacttaatgggattcttggagaaaataccgaggttgttttagct
gaatgctcaagatcgtttggttcgtggatgattacccatgccattgagctgctaacggct
gggagcacacaagctgatatattattgcacgaagagcgtaatcatctgggaggaatttgt
atagaggagctccatcgacttgtctatgctcaagttctgtcttcacatgcattaacttgg
caaattgctccgatatatttggcatcgtgcatgaagcaaggaatgggcttgttagagata
ttgttgtacaaacaacctgtaggacataaccaaatactgctcaagaatattgagatttgc
cggatgtatgaactcgacaatgttggttcaaacgcgatgaagattgccggagtacatcac
tggaagcatgggaagaaaggttctggagtcttctggcttcagcaagctcaagatgaattt
cgtttgaacagaattgctcagcagctgtttgattttgttgggaagtcggtctctgatgaa
agttttaagcaatgggaaggattgattgaattattgggatctcaatctaaagctgcaggt
ggtctcgactttctacacaagtatagagattttaagagatcccttcagcaggttactgat
atgacaagtatcgatgctgcacaaaaagcttctgaagctctcatattgcttatgaagaac
ccatcaacgcctcaacggttttggctatctcttttacatgacgcggtgcagttgcttaac
tggaaggagcgaactctcttgaatgtccctcaaaccaacttgttattaaataaactgcaa
gagttgtcaatggcaaggctacgccccgatttcatagaagcagacttgccgcctcaggcc
ttgagctctgttaggctggcccttgcaactaaccttggacgagccatcttggaggagtaa
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