Apium graveolens (celery): 141672401
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Entry
141672401 CDS
T11340
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141672401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrv03041
]
141672401
Spliceosome [BR:
agrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141672401
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
141672401
NCBI-ProteinID:
XP_074335091
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Position
1:complement(179937947..179942511)
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AA seq
484 aa
AA seq
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MATVADSFLADLDELSDNEEDILDEDNVEADNMEEDVDGELADIEALNYDDLDNVSKLQK
TQRYIDIMQKVESALEKGSEVSMQGVVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LLAEDLQKTVEACDRALTLDSAKKKVLDFVEGRMGCIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKRKNLAGFSSATSQFRVGYIEQTEIFQGTPPALRMRACRLLASK
STLAARVDSTGGDATGGVGRAFREEIRKKIDKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQNKLAA
KVAKKFKERSFGGGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSETGTFSK
IKRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttgctgattctttcctggctgatcttgacgaactttcggacaatgaggaa
gatattcttgatgaagacaatgtcgaggctgataacatggaagaagatgtagatggggag
cttgctgacattgaagcccttaactatgatgatctggataatgtatccaagctgcagaaa
acccagcgttacatcgatatcatgcagaaagttgaaagtgcactggagaagggatctgaa
gtctcaatgcagggcgttgttttggaggatgatccagaataccagctgatcgtggactgt
aatgcgttgtcagttgatattgaaaatgaaataattatcatccataattttattcgtgac
aagtaccgcctgaaatttccagagcttgaatcacttgttcatcatccgattgattacgct
cgtgttgtgaagaaaattggaaatgaagttgatctaacccttgttgatctagaaggacta
ttgccctcagctatcattatggttgtttcagttacggcgtcaaccacaagtggaaagcca
ctgctagctgaagatctccagaagactgttgaggcttgtgacagggctcttacattggat
tcagcaaagaaaaaggttcttgattttgtagagggtagaatgggatgtattgctccaaac
ctttctgctatagttggtagtgctgtcgctgcgaaattgatgggcaccgctggtggttta
tcggcactggctaagatgccagcatgcaatgttcagcttctgggtgccaagagaaagaat
ttagcaggattctcaagtgcgacttctcagtttcgtgtaggatacattgagcaaacagaa
atttttcagggcacgccccctgctttaagaatgcgtgcctgtcgtcttttggcttcaaaa
tctacacttgcggcacgtgtggattctactggaggagatgcaactgggggagttggaagg
gctttccgcgaggagatacgtaagaagatcgataagtggcaagaacctcctcctgcaaag
caaccaaaaccacttccagttcctgattctgagccgaaaaagaagagaggtggtcgtaga
ttaaggaaaatgaaagaaagatatgctataacagacatgcgcaagctagcaaacaggatg
cagtttgggataccagaagagagctctttgggggatggtcttggggaaggatatggaatg
cttggtcaggctggaagtgggaagttgcgtgtatcagttggtcagaacaagcttgctgct
aaagttgccaaaaagtttaaggagaggagctttggtggcggcgctacctcaggactgact
tcgagtttggccttcacacctgttcagggaattgagctctctaatccacaggctctagct
aatcagctgggtagtggaacacaaagcacctacttctctgaaacaggaactttttcgaag
ataaagagaccttga
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