Apium graveolens (celery): 141672404
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Entry
141672404 CDS
T11340
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
agrv Apium graveolens (celery)
Pathway
agrv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141672404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
agrv04040
]
141672404
Ion channels [BR:
agrv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141672404
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Motif
Other DBs
NCBI-GeneID:
141672404
NCBI-ProteinID:
XP_074335092
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Position
7:271660454..271671507
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AA seq
772 aa
AA seq
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MNVSDEAEVHMQMDKSAKPKFRSSSTSMRSASISIPMHSLSSSDVESHFLGHSGPLHSER
NISYMQMSDPVYANVQNDKCFQPTRGAMVSRAAEKISEKYPSVKGVLQNDRPLSNHVVAN
ENLLRAGQLGMCNDPYCTTCPTYFEGQRRTKKVFSVSDQKQFLNINYQQFSIPDIKQGDA
KGWAWRTFSSLYHYIPGVMNPHAKIVQFWNKFFVISCLFAVFLDPLFFFLLSVKQEHKCI
VFNEPMTKVLITLRSLTDFIYLLHMLLQFRLAYVAPESRVVGSGDLVDHPRRIALNYLRG
HFLIDFFVVLPLPQIIIWLVLKKFKGSSGANYAKNFLRATILIQYIPRLYRILPLLAGQT
ASGFIFESAWANFVINLLTFVLSGHVVGSCWYLFGLQRVNQCLRDACLENWCIRYIDCGQ
GNENERFQENPVSWTNWTNNANANACFGQGSFSYGIYTQTVGLTTESALTTRYMYSLFWG
FQQISTLAGNLTPSYFVGEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLELSLRRR
DVEQWMSHRRLPEELRRQIRESERYNWAATRGVDETMLLENLPEDLQRDIRRHLFKFVNK
VRIFSLMDEAILDAMRERLKQKTYIKGSRILVPGGLIDKMVFIVRGKLESIGEDKNIVPL
SEGDVCGEDLLTWCLEHSSVNKDGKRIRIPGHKLLSNRMARCLTNVEAFILRAADLEEVT
SLFSRLLRNPRVQGALRYESPYWRCLAATRIQVAWRYRKKTLSRATTVSSAS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttcagacgaagctgaggttcatatgcaaatggataaatctgcgaaaccaaag
tttagaagctcctctacttcaatgcgtagtgcatcaatatccattccaatgcattctcta
agttcgagtgatgtggaaagtcatttcttaggtcatagcggccccttgcatagtgaaaga
aatatatcatacatgcaaatgagtgatcctgtatatgcaaatgttcagaatgacaaatgc
tttcagcctacacgaggtgcaatggtgagcagagcagctgagaaaatatcagagaagtat
ccttcagtcaaaggagtgcttcagaacgatcggccacttagcaatcatgtagtggcaaat
gaaaatttgttaagggctggtcaattgggaatgtgtaatgatccttattgcacgacatgc
ccaacgtactttgaagggcagcgaaggaccaagaaagtattcagtgtatctgaccagaag
cagtttcttaatatcaattaccagcagttttctatccccgacatcaaacagggagatgcc
aaaggttgggcgtggagaacattttcttctctgtatcactacattcccggagttatgaat
cctcatgctaaaatagttcaattttggaataagttcttcgtcatctcgtgcttatttgca
gtttttctagacccactcttcttctttttgctgtccgtaaagcaggaacacaaatgcata
gtctttaacgagcccatgacgaaagttcttattactttgagaagcctgactgatttcatt
tatttactgcacatgcttcttcagttcagactagcctacgtcgcacctgaatcaagggtt
gtgggttctggtgatctagttgaccatccaagaaggatagctctcaattatctccgcgga
cactttcttattgatttctttgtagtgctaccacttccccaaataattatatggctggtt
ctcaaaaagtttaaagggtcttctggtgcgaattatgcaaaaaactttctgcgagcaaca
attctcattcagtatatcccgaggttgtataggattcttccattgcttgctggtcagact
gcaagcggtttcatctttgagtcagcatgggcgaatttcgttattaatctcctcacattt
gtgttgtccggccatgtggttgggtcttgctggtatctctttgggttacagagggtaaat
caatgtcttagagatgcctgtcttgagaattggtgtataagatatatagactgtgggcaa
ggaaatgagaatgagaggttccaagaaaatccggtgtcatggacaaattggacaaacaac
gccaatgctaatgcttgttttggtcaaggcagtttttcatatggaatctacacgcaaaca
gttggacttaccaccgaatctgctctaaccacgagatacatgtattcattgttctggggt
tttcagcaaattagtactctggctgggaatcttactccgagttactttgtgggggaagtt
ctgttcactatggccatcattggcctgggtcttttgctttttgctcttctcattggaaat
atgcagaactttctacaagcactcggacgcaggaggctagaattgtctttaaggcgccgg
gatgttgagcaatggatgagccataggcgtctgccagaggaacttagaaggcagatccgt
gaatcagaacgctataattgggctgccactagaggggtagatgaaactatgcttttggag
aatctaccggaagatcttcaaagagatatacgtcgacatctctttaaatttgtgaacaaa
gttcgaatcttttctctaatggatgaagccatcttagatgccatgcgtgagagactgaag
caaaaaacatatatcaaagggagtagaatcttagttcccggaggtctgattgataagatg
gtttttattgttcgaggtaagcttgagagcattggagaagataagaacatagttcctttg
tctgaaggggatgtttgtggagaagatcttcttacctggtgccttgagcattcttctgta
aacaaagatggaaaaagaatcagaattccaggacacaagttgctaagcaataggatggca
agatgcttaacaaatgtagaagcatttatactccgagctgcagatctcgaagaagtcact
agtcttttctctaggttactgagaaatccacgcgttcaaggtgccctcaggtacgaatct
ccttactggcggtgtcttgcagcaactcggatccaagttgcatggaggtataggaagaag
acgttgagtcgtgcaacaactgttagttctgcatcatga
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