Apium graveolens (celery): 141673066
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Entry
141673066 CDS
T11340
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141673066
04121 Ubiquitin system [BR:
agrv04121
]
141673066
Transcription factors [BR:
agrv03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
141673066
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
141673066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
141673066
NCBI-ProteinID:
XP_074335901
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Position
7:249233548..249237861
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AA seq
1142 aa
AA seq
DB search
MSFQARTDRRENNNNNSNNSNNRTRVSQAQGGRGGRREWIPRGTNAVATTNLTPDITAAA
AAGPVSNVVESLPAQIRQKPNGNGEGSSMGGRGRPNGSYGDFSKRSGMNGGGNRMSLGSR
GQQYGRPLNQKREKEKDRNVAKDSSLPQLVQEIQEKLMKGTVECMICYDMVKRSAPVWSC
TSCYSIFHLHCTKKWARAPTSVDLSAGKEQGGFNWRCPGCQSVQLTSSKEIRYVCFCRKR
EEPPSDLYLTPHSCGEPCGKPLEKEVPGAGVSKEDLCPHLCVLQCHPGPCPPCKAFAPPR
LCPCGKKVITTRCSDRKSVLTCGESCDKLLDCWRHRCEKICHVGPCDTCQVVINASCFCK
KKSEAVLCGDLTVKGEVDVGDGLFSCPLPCEKLLNCGNHVCTAPCHPGPCGDCELLPGKI
KTCCCGKTSLEQERHSCFDPIPTCVEICSKTLPCGSHKCKELCHSGDCAPCQMLVTQKCR
CGSTSRTVECYKTMSEEKFTCDKPCGHKKSCGRHRCSERCCPLSNSKNPLPGDWDPHLCS
MSCGKKLRCGQHSCESLCHSGHCPPCPETIFSDLTCACGRTSIPPPQPCGTPPPSCQLPC
SVAQSCGHSSTHSCHFGDCPPCSVPVAKECTGGHVVLRNIPCGSKDIRCNQLCGKTRQCG
MHACARTCHPSPCDSSIVPASGSRVSCGQTCGAPRRDCRHTCSALCHPSSPCPDVRCEFR
VTITCSCGNISATVPCDAGGSNNGHNVDSLLELSAVQKLPVPLQPVEANGKRIPLGQRKL
TCDDECLKVERKRALADAFGITPNMEALHFGESSAVSEVLTDLFRRDPKWVLAVEERCKF
LVLGRGRGGTSALKVHVFCPMLKEKRDAVRLIAERWKLSISAAGWEPKRFIVVHVTPKSK
APARIFGAKGTTTANMISPSVFDPLVDMDPRLVVALFELPSDADISALVLRFGGECELVW
LNDKNALAVFSDPARAATAMRRLDQGSLYYGAVVLQNGGVPGVASGANAWGGSGVPKDGG
SGLAIKGNPWKKAVVQEPDSKVSSWGDEEDMVGDSTRLEASVRKGNGVPIPASSNRWSIL
DAEIIPSSSTSIVQITDPVEQVKSQMVSRLESGASSSVTIEKHMGKDDQRPEVVEDWEKA
YD
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaggcacgaacggatagaagagaaaataataataacaatagtaacaacagc
aataatcggactcgggtttcccaagctcaaggcggtcgaggtggacgaagagagtggatt
ccgagagggactaatgctgttgctactacgaatttaacgcctgatataactgctgctgct
gctgctgggcctgtttctaatgtggttgagagtttacctgcgcagataaggcagaaaccg
aatggaaatggtgaggggtcttcgatgggtgggagagggaggccgaatggaagttatggg
gattttagtaagaggtcggggatgaatggcggtgggaatagaatgagtttgggttcgagg
gggcagcagtatggtaggccgttgaatcagaagagggagaaggagaaggatcgcaatgtg
gcaaaggactctagcttgccgcagcttgtgcaggaaattcaagagaagttgatgaagggt
acggtggagtgcatgatttgttatgatatggtgaaaagatctgcgcctgtttggtcttgt
actagctgttactcgatttttcatttgcattgtacgaagaaatgggctcgtgctcctact
tctgttgacctctcggctgggaaggagcaagggggatttaattggcggtgccctggttgt
caatctgttcagcttacatcctcaaaggagattcgatatgtttgtttttgtagaaagagg
gaagaaccaccatctgatctatatctgactcctcattcttgtggagaaccttgcggaaaa
ccacttgagaaggaggttccaggtgctggtgtgagcaaggaggatctctgtccacatctt
tgtgttttgcaatgtcatcctggtccttgcccaccttgtaaggcttttgctccaccaaga
ttgtgtccgtgtggcaagaaggtaatcacaacaaggtgctctgatcgcaagtctgttctt
acctgtggagagagctgtgataaacttcttgattgttggcgtcaccgttgtgaaaaaatt
tgtcatgtcggtccgtgtgatacttgtcaggttgtaattaatgcctcttgtttttgtaag
aaaaagtctgaagctgttctttgcggagacttgactgtgaaaggagaagttgatgttggg
gatggtctattttcatgccctttgccttgtgaaaaactgcttaattgtggtaaccatgtc
tgcacagcaccttgccatccgggtccatgtggggattgtgagttgttgccaggcaagatt
aagacatgctgctgcggtaaaacaagcctagaacaggaaaggcatagttgttttgatcca
attcctacctgtgtggaaatctgcagcaaaacactcccttgtgggtcacataagtgcaag
gagttgtgccactcaggtgattgtgcaccatgtcaaatgcttgtaactcagaagtgccga
tgtggatcaacctctcgaactgtggaatgctataagacaatgagcgaggaaaaatttact
tgtgataaaccttgtggtcataagaagagctgcgggaggcatcggtgcagtgagagatgc
tgccctctttctaattcaaaaaatccattgccaggtgattgggacccacatctgtgctca
atgtcctgcggaaagaagttgaggtgtgggcaacattcctgtgaatccctttgtcacagt
ggacattgccctccttgccctgaaacaatatttagtgacctgacatgtgcatgtggaaga
acttcaattcctcctccacagccttgcggtacgcctccaccttcatgtcagttaccttgc
tcagttgctcagtcttgtggccactcatccacccatagttgccactttggggattgtcct
ccatgttcggttcctgtagcaaaggagtgtactggaggacacgttgtcctgaggaacata
ccttgtggatccaaagatatcagatgcaatcagctttgtgggaaaactagacaatgtggc
atgcacgcatgtgcaagaacttgtcatccttcaccatgtgattcttctattgtacctgct
tctggttcgagggtttcttgtgggcaaacatgtggtgcaccaagaagagactgtcggcat
acatgcagtgcactttgtcacccctcttcaccgtgtcctgatgttagatgcgagtttcgg
gtcacgattacatgttcttgtggaaatataagtgccactgttccttgtgatgccgggggg
agcaacaacgggcacaatgttgactcccttcttgaactttctgcagtccagaaactgcct
gttccgcttcagccagtggaagcaaatgggaagcgaatacctcttgggcaaaggaagctc
acctgtgacgatgagtgtttaaaggtggaacgcaaacgagcacttgcagatgcatttggt
attactccaaacatggaagcacttcattttggtgagagttctgctgtttcagaagtgcta
actgacttgtttaggcgagatcccaagtgggttttagctgttgaggagagatgcaagttt
ttggtccttggcaggggtagaggtggtaccagtgctctaaaggttcatgtgttctgtcca
atgctgaaagagaaaagagatgcagtgaggctaatagctgagcggtggaagctatcaatc
agtgctgctggctgggagcccaagcggtttattgtggttcatgttactccgaaatcgaaa
gccccagctcgtatttttggtgccaaaggtacaaccacagcaaatatgataagtccgtct
gtatttgatcctctggtggacatggatcccaggcttgttgttgctctatttgagttgcca
agtgatgcagatatcagtgcattggtcttgagattcggcggcgagtgtgaattagtctgg
ttgaatgacaagaatgcgttggctgtctttagtgatcctgctcgtgctgcaactgccatg
aggaggctagatcaaggatctttgtattatggggcagtagttcttcaaaatgggggagtt
cctggagttgcttcaggagccaatgcttggggtggttctggggtgccgaaagacggagga
tcgggtttggctataaagggaaatccatggaaaaaggctgtggtgcaggagcctgattcg
aaggtgagttcatggggtgatgaggaggatatggtaggtgattctactagactggaagct
tctgttcggaagggaaatggagttccaattcctgcttcatcgaacagatggagcattcta
gacgcagagattattcctagttcatccacttcaattgtgcaaattacagatcccgtggaa
caggtaaaaagccaaatggtttcaagactagaatctggagcaagttcttcagttacgatc
gaaaagcacatgggaaaggatgatcaaagaccagaggttgtggaggattgggagaaagct
tatgattga
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