Apium graveolens (celery): 141675224
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Entry
141675224 CDS
T11340
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141675224
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141675224
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141675224
NCBI-ProteinID:
XP_074338035
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Position
7
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AA seq
348 aa
AA seq
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MNKIDSCWRAKSNWAANRRALADCAVGYGKDAIGGKFGAFYVVTDSSDDPIKPKPGTLRY
GVIQANPLWITFAKNMVIKLKNELIMNSYKTIDGRGAKVEIAYGPCITIQGVSHVIIHGI
SIHDCKPGKSGLVISTPLHVGRRLGCDGDGISIFASSNVWIDHCSLSRSSDGLIDVIHAS
TAVTISNNYFSQHDKVMLLGHNDNFSADKIMKVTIIYNHFGPGLVQRMPRVRLGYAHVAN
NMYEAWQMYAIGGSSNPTIFSQGNYFNAPNYLKHKQVTKREVNNGWKNWKWRSSMDRFMN
GAYFVQSGYGSCSPSYSKAQSFTVVDGSMVPAITSDAGPLLCSTNKAC
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatagactcatgttggcgtgccaagtccaattgggctgctaaccgacgtgcc
ttggctgattgtgctgtcggctacggaaaagatgcaatcggtggaaaatttggtgcattt
tatgtagtcacggattcgtctgatgatccaataaaacctaagcccggtacactacgctat
ggtgttatccaggcaaaccctctttggatcacgtttgcgaaaaacatggtcataaaactc
aagaatgagctgataatgaatagttacaagactatagatggtagaggagcgaaagttgag
attgcttatggaccatgtataacaatacaaggtgttagccatgttattatacatgggatt
agtattcatgattgtaaacctggaaaatctggccttgttataagcacacctttgcacgtg
gggcgtcgtcttggctgtgatggagatggtatctctatatttgcatcttcgaatgtttgg
attgatcattgctccctgtcaagaagtagtgatggtctcattgatgtcattcatgcttcc
actgccgtcacaatctctaacaattacttctctcaacatgataaagttatgttactgggg
cacaacgataatttttcagcagataaaataatgaaagttaccattatttataatcatttc
ggccctggtttagtacaaaggatgccaagagtgaggctaggttatgcgcacgtagccaac
aatatgtacgaagcatggcagatgtatgccattggtggcagttcaaacccaactatcttt
agccaaggaaattacttcaatgcgcccaattatctcaaacataaacaggtaacaaaaaga
gaggtgaacaatggttggaagaattggaagtggaggtcatctatggacagatttatgaat
ggggcatactttgtgcaatctggatatggtagctgctctccaagctactccaaagctcaa
tcatttaccgttgtcgatggatccatggttccagcaataacatctgatgctggtccattg
ctctgcagtaccaacaaagcatgctaa
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