Apium graveolens (celery): 141676012
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Entry
141676012 CDS
T11340
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141676012
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agrv01009
]
141676012
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141676012
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141676012
03041 Spliceosome [BR:
agrv03041
]
141676012
Enzymes [BR:
agrv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141676012
Protein phosphatases and associated proteins [BR:
agrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
141676012
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141676012
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141676012
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141676012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141676012
NCBI-ProteinID:
XP_074338184
LinkDB
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Position
1:complement(195629661..195632908)
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AA seq
325 aa
AA seq
DB search
METLVLDDIINRLLQVRGRAGKQVLLKESEIKQLCLCSKDLFLKQPTLLDLEAPIKICGD
IHGQYSDLLRLFEYGGFPPRSKYLFLGDYVDRGKHSLETICLLLAFKIKYPKNIFLLRGN
HECDSVNRIYGFYDECKRRFNVKIWKLFTDTFNCLPVAALIDERILCMHGGLSPDLNSLD
QIRNLKRPVNVPESGLLCDLLWSDPSRNLKGWGANDRGVSYTFGADKVTEFLQKHDLDLI
CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGVLMSVDETLLCSFQILKPEEKNPK
FMLGSLSTMRGNPFTKTKSFIGTSI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttggttcttgatgatataatcaacagattgttacaagttagaggaagagca
gggaagcaagtgctgctaaaagagtcagagatcaagcagctttgcctttgttctaaagat
ttgttcttgaaacagcccactcttttggaccttgaggcacctatcaaaatttgtggggat
attcatggtcaatattctgatctactgaggcttttcgaatatggtggcttccctccaaga
tccaaatatctatttttgggcgattatgtagatcgtggaaagcacagtttggaaaccata
tgccttctccttgcattcaagataaagtatcctaaaaatattttccttttgaggggcaat
cacgaatgtgattctgtaaatcgcatatatggattttatgatgagtgtaagcgaagattc
aatgtcaagatatggaaactctttacagatacttttaactgccttcccgtggcagccctc
atagatgagaggatactgtgtatgcatggaggtctttcacctgacttaaacagtttagat
caaattaggaatttaaagcgtccagttaatgttccagagagtggcttactctgcgatcta
ctgtggtcagatcctagtaggaatcttaaagggtggggagcaaatgatagaggagtatcc
tatacctttggtgccgataaggtgacagagtttcttcaaaagcatgatcttgaccttata
tgccgtgctcaccaggtagtcgaagatggatatgagttttttgcagatagacaacttgta
actatattctcagcccccaactactgtggagaatttgataatgctggtgttttgatgagc
gtggatgaaacgttgttgtgctctttccaaatactaaagcctgaagaaaagaatccgaag
tttatgttagggagcttaagtacaatgcgaggaaatccattcaccaaaacaaagtcattc
attggcacaagtatatga
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