KEGG   Apium graveolens (celery): 141677140
Entry
141677140         CDS       T11340                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    141677140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agrv03021]
    141677140
Enzymes [BR:agrv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     141677140
Transcription machinery [BR:agrv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     141677140
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 141677140
NCBI-ProteinID: XP_074339005
LinkDB
Position
8:complement(183262492..183279085)
AA seq 1168 aa
MDVDYVSKESNDVLRGLNEVELKRFLKTAAQSFFKQYGLISHQLNSYNDFIRNGIQEVFD
SVGEIIVKPLHDSSQYGDGEWRSASVKFGKVTFEQPKFYGGEKFPTDDGDCFVDMLPRHA
RLQNMTYAARMQVQVNFKVYNEKMVRSDNFGNDEHQYIEKVLSSESCTEMIIGKLPVMVK
SDLCWMKGVNKGDCDFDHGGYFIINGAEKIFVAQEQSCLKRLYLACNPNWIASYRHTFIR
KRVHVKLVDTSKIQQIVGRKVLIVSFLSEMPIWILFFALGVSSDRDVVNLIDVDAEDDTI
VNILRASMREADKQCENFRRRGMALRYLEQQFKTCEYPPEESVEECIDKLLFPKLIGIKQ
KARFLAYMVKCLLKAYTGRRKLDCRDDFRNKRLELAYELLDRELKVHINHAKRKMIKNMQ
RDLDGDRTMNRIEHYLDCSIITNGLSRAFSTGAWSHPYKKAEKISGVVANLSRTNPLQSI
SEMRRTRQRVEYTGKIGGARYPHPSYWGKICFVSTPDGENCGLIKNLASTGLVSTSILEP
FFDKLLDCGMEELVDDTSTSLHGKNFIFLDGELVGVCHDSASFVSKLRSMRRKKKVPSQV
EIKRDAQQGEVRIFCDAGRVLRPLLVVRNIVKIKSINKGDYGFQSLLDNGIIELIGAEEE
EDCCTAWGIEYLGTKNKEDLPVKYTHCELDMSFLLGLSCGLIPFANHNHAKRVLYQSQKH
SHQAIGYSTTNPHIRVDTLTHQLYYPQKPLFRTMVFDCLGRPDCNVMPSRPEFYNGQCAI
VAVNVHFGYNQEDSLVMNRASAERGMFRSEHIRSYKTDIYNEEAFSKPPKVEDLMKFGKI
QSRVGRVDSLEEDGFPYIGASLRAGDIIIGKHAESGADQSLKLKHTERGTVHRVVLSAND
EGKNFGLVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTSQGIVPDIVINPHAFP
SRQTPGQLLEAALGKGIALNGIEKYATPFSTLSVDGIADQLHKAGLSRWGSERVYDGRTG
EMIRSLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCL
IAHGASANLQERLFLCSDYSQMHICRTCKHTANVIQRTMRGKHKIRGPYCRYCESAENIV
KVDVPFGAKLLCQELFSMGISMKFETQL
NT seq 3507 nt   +upstreamnt  +downstreamnt
atggacgtggattatgtttcgaaggagagtaacgatgttctaagaggtctaaatgaagtt
gaactgaaaaggtttttgaaaacagctgctcaatcctttttcaaacaatatggcttgata
agtcatcaactgaactcttataacgatttcataagaaatgggatccaagaagtttttgat
tcagttggcgagattatagtaaagcctttgcatgattcatctcaatatggtgatggtgaa
tggagatctgcatcagtaaagtttggaaaggtcacctttgaacaaccaaaattctatgga
ggcgaaaaatttccaactgatgatggtgattgttttgtggatatgttgcccagacatgca
aggcttcagaatatgacatatgcagccaggatgcaagttcaggtcaactttaaggtatac
aacgaaaagatggtcagaagcgacaactttggaaatgatgaacatcaatatatagagaag
gttctttctagcgaaagttgcacggaaatgattatagggaagcttccggttatggtgaaa
tctgatttatgctggatgaaaggagttaacaaaggtgattgtgattttgaccatggaggt
tatttcataatcaatggagctgagaagatctttgttgctcaggagcaaagctgcttgaag
agactatatttggcttgtaatcccaattggattgcttcataccgtcatacattcataagg
aaaagggtgcatgtgaaactagtggatacttctaaaattcaacaaattgtaggaaggaag
gttctaattgtctctttcctaagtgagatgccaatctggatattgttttttgcgcttggt
gtgtcctccgatagagatgttgttaaccttattgatgttgatgctgaagatgatactatt
gtcaatattctaagagcttcaatgcgtgaagctgacaagcaatgtgaaaattttcgtaga
agaggaatggcacttaggtatctagaacaacaatttaagacttgtgaatatccaccagaa
gagtctgttgaagagtgcattgacaagcttctgttccccaaactcattggtatcaagcaa
aaggctcgttttttagcctatatggtgaagtgtctcttaaaggcctatactggccgcaga
aaattagattgcagggatgattttagaaacaaaaggttggagctggcctatgagctttta
gatcgtgaacttaaagttcatattaatcatgctaagcggaaaatgatcaagaatatgcaa
agagatcttgatggagatcgtactatgaatcgaattgaacactatctagactgctcaatt
ataacaaatgggctttctagggcattctccactggggcatggtctcatccatacaagaaa
gcagaaaagatatctggtgtagtggctaatttgagccgaactaatccgctccaatcaata
tctgagatgagaagaacacgtcagcgtgttgaatacacgggaaaaattggcggggctcga
tatccccacccttcctattggggaaagatatgttttgtctctactccagatggagaaaat
tgtggtttgataaaaaatttagccagcactggacttgtcagtacgagcattttggaacca
ttttttgacaaattgctagactgtgggatggaagagttggtcgatgatacttcgacttca
cttcatggaaagaattttatttttcttgatggagaactagttggagtttgtcatgattcg
gcctcatttgtttcaaaattgagaagtatgcgacgcaaaaagaaagtaccgagccaggtg
gaaatcaaaagagatgcgcagcagggagaagtccgcatattttgtgatgctgggagggtt
ctacggcctcttttagttgtcagaaatatagtgaaaatcaaatcaatcaacaagggagac
tatggctttcaatcccttttggacaatggcattattgagcttatcggagctgaggaggag
gaagactgttgtactgcatggggaattgagtatctggggaccaaaaataaagaagattta
ccagtgaagtatacacactgcgaacttgacatgtcatttctcttaggcttaagctgtgga
cttatcccatttgcgaatcataatcatgcaaaaagggttctctaccagtctcagaaacac
tcccatcaggcgataggttattctactacaaatccgcacattcgagttgatactcttact
catcagttatattatccccaaaaacctcttttccgaacgatggtttttgattgtcttgga
agacctgattgcaatgtaatgccgtcaaggcccgaattttataatgggcaatgtgctatt
gtggcagttaacgttcactttggttataaccaggaagattctttagtcatgaatcgtgct
tcagcagaacgtggtatgtttcgatcagagcacatcagaagctacaaaactgatatctac
aacgaggaggcattttccaagccaccgaaagtagaagacttaatgaaatttgggaagatc
caaagcagagttggacgtgttgacagcttggaagaagatggtttcccatatattggtgca
agtctgcgagctggtgatattattattgggaaacatgctgaatctggggctgaccagagt
ctaaaactgaagcacactgaaagaggcacggttcacagagtagtactctctgctaatgat
gaaggaaaaaacttcggtttagtatctttgagacaggttcgatctccatctttaggggat
aaattttctagcatgcatgggcagaagggcgtccttggctttttggagtcgcaggagaat
tttcctttcacctcacaagggatagttccagatatcgtgatcaacccacatgcatttcct
tcacgtcagactcctggtcagcttttagaggccgctctgggtaaagggattgccctcaat
ggtattgaaaaatatgccacccctttttccactctctccgttgatggcatagcagaccaa
ctccacaaggctggattatctagatggggaagtgagagggtttatgatggccgtactggt
gagatgatacgctcgcttgtgttcatgggcccgacatgctaccagcggttaacccatatg
gctgaagacaaagtcaaattccggaacacaggcccagttcatcctctcaccaggcaaccg
gttgctgatcgtaaacggtttggtggagtaaagtttggcgagatggagcgggattgtctt
atagcccatggtgcatcagcaaatctgcaggagcgactcttcttatgtagcgactactca
cagatgcatatatgtcgaacatgcaagcacacagcaaatgtaatacagcgcacaatgagg
ggtaaacacaaaataaggggaccatattgccgttattgtgagtctgctgaaaacattgtt
aaggtagatgtgccttttggagcaaagctactatgccaagagcttttcagcatgggcata
tcaatgaagtttgaaacccagctttga

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