Apium graveolens (celery): 141677357
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Entry
141677357 CDS
T11340
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141677357
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141677357
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
141677357
NCBI-ProteinID:
XP_074339350
LinkDB
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Position
8
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AA seq
448 aa
AA seq
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MAVSKNMICLSALLLLLLFVGAKAILNNSGDLHSIKTDEKAELQNSVNSSMAPRLEDDDG
ESLNEHAVSNPDEVASMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDSNWHRNRKRLA
DCGIGFGRNAIGGRDGRFYVVTDSRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLK
QELIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPTHFG
WRTMADGDAISIFGSSHVWVDHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGH
SDSYMRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINS
QGNRYLAPANPFAKEVTKRVETPIGHWKGWNWRSEGDLLLNGAYFTPSGAGSTSSYARAS
SLGAKSSSMVGTITSGAGVLGCRRGHQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctaaaaacatgatctgtctttctgcattgctgcttctcttgctcttcgtc
ggagctaaggccattctcaacaactccggtgatctccattctatcaagactgatgagaaa
gcagagttacaaaactcagtcaactcgtcaatggcgccaaggttggaagatgatgatggt
gagagcttaaatgagcatgctgtttctaacccagatgaggttgcttcaatggttgacatg
agcatcagaaacagtactgagcggaggaaattgggatttttttcctgtggaactggtaat
cccattgatgattgttggcgttgtgactctaactggcatcgcaaccgcaagaggcttgct
gactgtggcattggttttggccgaaatgccattggaggtcgtgatggtcgcttctatgtt
gtcacagattcccgtgatgatgaccctgttaaccctagacctggtacgctccgccatgct
gttatccaggacaggcccctttggattgtgtttaagcgcgacatggtgatacaattgaag
caggagcttatcatgaatagcttcaagacaattgatggtagaggggtgaatgtccatatt
gctaatggagggtgcatcaccatccagtttgtaactaatgttataattcatggtctgcat
attcatgactgcaaacccactggcaatgctatggtgaggagttccccaactcattttggc
tggaggacgatggctgatggtgatgccatttccatctttggatcaagccacgtctgggtt
gatcataattcactatctaactgcgcagatggtcttgttgatgctgtcatgggctcaact
gccattacagtttccaataatcatttcacccaccacaatgaggttatgctgttgggtcac
agtgattcctatatgagggacaagcaaatgcaagttacaatcgcatataaccattttgga
gagggtcttattcaaaggatgcctagatgcagacacggttatttccatgtagttaacaat
gactatactcactgggagatgtatgcaattggtggaagtgcaagccctaccattaacagc
caaggaaacagatacttagcccctgctaatccttttgcaaaggaggtgacaaagcgagtg
gagacacctattggtcactggaagggttggaattggcgatcagaaggagacttgttactt
aatggagcctacttcactccatctggagcaggatctacatctagctatgccagagcttca
agcttaggggcaaaatcttcttccatggtcggcacaatcacttctggagctggtgttctt
ggctgtcgcagaggccaccagtgctag
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