Apium graveolens (celery): 141677707
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Entry
141677707 CDS
T11340
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
agrv Apium graveolens (celery)
Pathway
agrv03420
Nucleotide excision repair
agrv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141677707
09124 Replication and repair
03420 Nucleotide excision repair
141677707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
agrv03051
]
141677707
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141677707
Proteasome [BR:
agrv03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
141677707
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
141677707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
UBA_3
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
141677707
NCBI-ProteinID:
XP_074339845
LinkDB
All DBs
Position
8:complement(261848612..261855593)
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AA seq
396 aa
AA seq
DB search
MKVFVKTLKGSQFEIQVNPDDSIANVKRSIETVQGSAVYPAAQQMLIYQGKVLKDGTTLL
ENNVAENSFIVVMLSKSKSSSGEGSAAARAATHKAPRTSAPPSVPAPAVSQPPVATLAAP
APAPAPAPAPAPAPAPAPAPAPVVAPVPSEAAGSEANVYDSAASLLVAGSNLEGAIQQIL
DMGGGTWDRDTVIRALRAAYNNPERAVEYLYSGIPEQAEAPPVAPSPPSGQATNPLDQPP
AAAQPVPIASTGPNANPLDLFPQGLPDMGSNAAGAGNLDFLRTNQQFQALRAMVQSNPQI
LQPMLQELGKQNPHLMRLIQEHQADFLQLINEPVEGGENLLGQPQAITVTPEEQDAIERL
EAMGFDRELVLEVFFACNKNEELAANYLLDHMHEFE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagacattgaaaggaagtcaattcgaaattcaagtcaatcctgat
gattcgattgctaatgtgaagagaagtatagaaactgtacaaggatcagcggtttatcct
gctgcacagcagatgctcatctaccagggtaaagtgcttaaagatggcacgacattgctt
gaaaacaatgttgccgaaaatagttttatcgtcgtcatgttgtccaagagcaagagctca
tctggtgaaggttcagctgctgcaagggcagcaactcataaggcaccgcgaacaagtgcc
ccaccttcagttccagcaccagcagtttctcaacctccagttgcaaccttggctgcacct
gctcctgctcctgcacctgctcctgctcctgctcctgctcctgctcctgctcctgctcct
gctccagttgtagctcccgtcccctctgaagctgcggggtcggaggccaatgtttatgac
agtgcagcatcacttttagtagccggaagcaatcttgagggagcaattcagcagattctt
gacatgggcgggggcacatgggacagggatacagttattcgcgcacttcgtgctgcttat
aacaatccagagagagctgtggaatatctttattccggaatccctgagcaagcagaggct
ccacctgtggccccatcgccaccaagtggccaggctacaaacccccttgatcagcctcca
gctgctgcccaaccagttcctattgcttctactggacccaatgcaaatccattggatctc
ttccctcagggtcttcccgacatgggttctaatgctgctggtgcaggcaacttagatttt
ttacgcaccaatcaacagttccaagctttgcgagctatggtgcagtccaacccacaaatc
ttgcagcccatgcttcaggagttaggaaagcaaaatcctcatctaatgaggcttatccaa
gagcatcaggctgatttccttcagctgataaatgaacccgtggaaggcggcgagaactta
cttgggcagccacaggcaattacagtcacaccggaggagcaggatgctatagagcgtctt
gaagcaatgggatttgatcgagaactggttttggaagtcttctttgcgtgtaacaagaac
gaggagctggctgctaattacctcttagaccatatgcacgagtttgaataa
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