KEGG   Apium graveolens (celery): 141677848
Entry
141677848         CDS       T11340                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141677848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agrv03019]
    141677848
   03041 Spliceosome [BR:agrv03041]
    141677848
Messenger RNA biogenesis [BR:agrv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     141677848
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     141677848
Spliceosome [BR:agrv03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    141677848
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_10
Other DBs
NCBI-GeneID: 141677848
NCBI-ProteinID: XP_074340021
LinkDB
Position
8:73953808..73959496
AA seq 398 aa
MDLSKKRKTEENGGVFTDPPPQNTSQLSPEDIKKILEPFTKDQLLEIVQSSITRDPLTLS
AVRTIADNDPAQRKLFVRGLGWETTTEKLQSIFSSFGEVAEAIVITDKNSGKSKGYGFVT
FKHIDGAMVALREPNKKIDGRVTVTQLAASGVGGGGVGGGVDVSMRKIYVGNIPFEISSE
RLLGVFEGFGEIEEGPLGFDKQSGKAKGFAFFVYKTEEGARSSLVEPMKMIDGFQVNCKY
ATDGKKGRVGENVGQGQVGAPYGYQGQGQFGGAGQFGGFGMQQGGHQGPMVNSGPGFGNQ
GVGQVYSGPGGGGYGGNGQQFGTGMMQPGEYGGANSMGPGSVYRMPPSSAGLPPIGGYQD
GGSYGLPSAGFGQPQLPQQPAPRGPPGGLYQGVPPHYY
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggatctctccaagaaacgcaaaactgaagagaacggcggcgtattcaccgacccacca
ccacaaaacacctcccagttatccccagaagacataaaaaagattctcgagcctttcacc
aaagaccagcttctcgaaatagtccaatcttcaatcactcgtgaccctttaaccctctcc
gctgtccggaccattgcggacaatgacccggctcagcggaagcttttcgttagaggttta
ggctgggagactacaactgagaagttacaatcgattttttcgagtttcggagaagttgct
gaggcgattgtgattacggataagaatagtgggaagagtaaagggtatgggtttgttacg
tttaagcatattgatggggctatggttgcgttacgagaaccgaataagaagattgatggg
agagttacggttactcagcttgcggcgagtggggttggtggtggtggggttggtggtggt
gttgatgttagtatgagaaagatttatgttgggaatattccgtttgagattagtagtgag
aggttgttaggggttttcgaggggtttggggaaattgaggaagggcctttagggtttgat
aagcagagtgggaaggcgaaagggtttgcgttttttgtgtataagacggaggaaggggcg
aggagttcgttggttgaaccgatgaagatgattgatgggtttcaggttaattgtaagtat
gcgacggatgggaagaaagggagggttggggagaatgtagggcaagggcaagttggtgct
ccgtatgggtatcaggggcaaggccagtttggtggtgcggggcagtttggtgggtttgga
atgcagcaaggggggcatcagggtccgatggtgaattcgggtccgggatttgggaatcag
ggagttggacaggtttatagtggtccgggaggtggtgggtatggagggaatgggcagcag
tttggaactgggatgatgcagcctggggagtatggtggggctaatagtatgggacctggg
tcggtttatagaatgccgccaagttctgctggactgcctcctattggggggtatcaggat
ggtgggagttatggattgccatcagctggatttggccaaccacaattgccacagcagccg
gcaccgaggggtccacctggcgggttgtaccagggggtgcctcctcattactactga

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