Apium graveolens (celery): 141677856
Help
Entry
141677856 CDS
T11340
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv04120
Ubiquitin mediated proteolysis
agrv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141677856
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
141677856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141677856
Enzymes [BR:
agrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141677856
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141677856
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
141677856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141677856
NCBI-ProteinID:
XP_074340035
LinkDB
All DBs
Position
8:44574381..44582826
Genome browser
AA seq
691 aa
AA seq
DB search
MVGSSSVGAIVPTVKSDPIMITDVEGGGAEAERSAPPPSIANQVEVVVMQKMTEMESIEM
DRDFLCPICMQIIKDAFLTSCGHSFCYMCIVTHLENKSNCPSCTHFLTTNHIHPNFILNK
LMMKTCARQIAKTATPFEQLRQALQKGCEVSVKELDILLSMLAEKKRKMEQEEAETNLQI
MHDFLQCLKKQKLEELNGIQAELRYIKEDISVVERQRIELYQERERYAVKSKLLPEGTST
KTEWPSLVDKCSSGIKSSPNVQGQCRMPSGSWQDRRADAKALRSSQMPQRKDACSGSDSP
HNTQSGVSAARKRRIHAQFNELQECYLQKRRQQDRQAHKQEKRDTKAISREGYSVGLEDF
QTVLSSFTRYSRLRVIAELRHGDLFHAANIVSSIEFDRDDELFATAGVSRRIKVFEFNSV
VNESADVQCPVVEMSTRSKLSCLSWNKYTKNHLASSDYEGIVTVWDVNTRQSVMEYEEHE
KRAWSVDFSKTEPSMLVSGSDDCKVKIWCTKQEASVLNIDMKANICSVKYNPGSSFHVAV
GSADHHIHYYDLRNISQPIHVFTGHRKAVSYVKFLSHNELASASTDSTLRLWDVKENLPL
HTYRGHANEKNFVGLSVNSEYLACGSETNEVFAYHKDISKPAAWHRFGADSEEAEDDPGS
YFISAVCWKSDSPTMLTANSRGTIKVLVLAA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggtggggagtagttcagtaggtgcaattgtaccaacagtgaagtcggatccgatcatg
atcactgatgtcgaaggcggcggagctgaagctgaacgttcagctccgccgccttcgata
gctaatcaggttgaggtggtggtgatgcagaagatgacggagatggagtcaattgagatg
gacagggatttcttgtgtccgatatgcatgcaaattattaaggacgcgtttctgacttcg
tgtggacatagtttttgttatatgtgtattgttacgcatttggagaataagagtaattgt
cccagttgcactcattttcttaccaccaaccacattcatcctaattttattcttaataag
ttaatgatgaagacttgtgctcgtcaaatagcaaagactgcaactccatttgaacaactt
cgtcaggcactacaaaagggatgtgaggtatctgttaaggagctggacatcctcttaagt
atgctggctgagaagaagcggaaaatggagcaggaagaagctgagactaatttacagata
atgcacgactttttgcaatgtctgaagaagcaaaagcttgaagagctcaatgggatacaa
gctgagctgcgttacatcaaggaggacataagtgttgttgagagacaaagaatcgagttg
taccaggaacgagaaagatatgcagtgaaatcgaagttacttcctgagggtacttcgaca
aaaacagagtggccttcattggttgataaatgtagcagtggaataaagtctagccccaat
gtgcaaggtcagtgcaggatgccatcaggcagttggcaagataggagagctgatgcaaag
gctcttagaagttcgcaaatgccccaaaggaaggatgcttgtagtggatctgattcacca
cacaatactcaatcaggagtctctgcagcacggaagaggcggattcatgcacagtttaat
gagctacaagaatgttatctgcaaaaacggcgtcagcaggataggcaggcacataaacag
gaaaagagggacacaaaagctataagcagagaaggttatagtgtaggacttgaagatttt
caaactgtcctgtctagttttacacgctacagccggcttcgggtcatagctgaacttagg
catggggatctttttcatgctgcaaatattgtatctagcattgaatttgatcgagacgat
gaattatttgctactgctggagtttcccgtcgtattaaagtgttcgagtttaattcggtg
gtgaatgaatcagcagatgtgcaatgccctgttgttgaaatgtctactcgctccaaactt
agttgcctaagctggaacaagtacacaaaaaaccacttggccagcagtgattatgagggt
attgtaactgtttgggatgtaaatactcgccagagtgtgatggagtatgaggagcatgag
aaaagagcgtggagtgtggatttttcaaaaactgagccttcgatgcttgtatctgggagt
gatgactgcaaggttaagatatggtgtacaaaacaggaggcaagtgttcttaatattgac
atgaaagcaaatatatgttctgtgaagtataatcctggatctagctttcatgtggctgtg
ggctctgctgatcatcacatccattattatgacctgagaaatataagccaacctatacat
gtctttaccggtcacagaaaagctgtttcctatgtaaaatttttgtctcacaatgagcta
gcttctgcttctactgacagcacattgcggttgtgggatgtaaaggaaaacttaccattg
cacacatatagaggacacgccaatgagaagaattttgtaggtctctcagtgaatagtgaa
taccttgcttgtggtagcgaaacaaatgaagtgtttgcatatcataaggacatctctaaa
ccagctgcgtggcatagatttggtgctgattcagaagaagcagaagatgatccaggttct
tacttcatcagtgctgtttgttggaaaagtgatagtccaacaatgctaactgcaaatagt
cgaggaacaattaaagttctggtacttgctgcataa
DBGET
integrated database retrieval system
