Apium graveolens (celery): 141678098
Help
Entry
141678098 CDS
T11340
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrv03041
]
141678098
03009 Ribosome biogenesis [BR:
agrv03009
]
141678098
Enzymes [BR:
agrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141678098
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
141678098
Ribosome biogenesis [BR:
agrv03009
]
Eukaryotic type
90S particles
Helicases
141678098
Pre-60S particles
141678098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
141678098
NCBI-ProteinID:
XP_074340434
LinkDB
All DBs
Position
8:30198897..30206615
Genome browser
AA seq
575 aa
AA seq
DB search
MANNEIIPDTNPTQNPKLGYESVKKKRKRKRGKKEDEKLCSGEMNEKGESGGEEKEFVGT
KEVEHDNEVEQGDEVEEEKKIKKKKVKSGSGIMSSVMFESMSLSEPTMKAIKDMGFHYTT
EIQARSLPLLIKGIDVLGAARTGSGKTLAFLVPAVELLYQLHFAPRNGTGVIIICPTREL
AIQTHAVAKELLKYHSQTHGLVIGGSARKTEAERLAKGVNLLVATPGRLLDHLQNTKGFI
YNRLKCLTIDEADRILEANFEEEMKQIIKILPKERQAALFSATQTEKVADLACLSLKDPV
YVGVDDERNWVTNEGLEQGYCVVPCAKRFIVLYSFLKRHQSQKVMVFFSSVDSVKFHSEL
LKYIHVDCFDIHGQQKQQKRTTTFFDFCKAEKGMLLCTNVAARGLDIPSVDWIIQYDPPD
DRKEYVHRVGRTARGEGSKGNALLFLTPEELQFLSHLKAAKVPVKEYEFPEKKLANVQSH
LEKLVSNNYYLNKSAKEAYRSYVLAYNSHSSKDIFNVHRLDLQGVAASFCFDSPPKVCIN
IDSGASKFRNTKRKDGRSRNGFSSSNPYGNRSSGH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggccaataatgagataattcctgatacgaacccaacccagaaccctaaactaggatat
gagagtgtgaagaagaaacgtaagaggaagagaggtaagaaagaggatgagaaattgtgt
tccggggagatgaatgaaaagggagaaagtgggggtgaggaaaaagaattcgtgggaacg
aaagaggttgagcacgataatgaggttgaacaaggggatgaggttgaagaggagaagaag
attaagaagaagaaggtgaaaagtgggagtgggattatgagcagtgtgatgtttgagtcg
atgagtttgtctgaacctaccatgaaagcaattaaagatatgggttttcattacactact
gagattcaagctagatctttgccacttcttattaaaggcatagatgttcttggtgctgcg
aggacaggttccgggaagacacttgcctttttagtaccagcagttgagttgctttatcag
cttcattttgctcctcggaatggaacgggtgttatcatcatttgcccaactagggaactt
gccatacagacacatgcagttgcaaaggaacttctaaagtatcattctcagactcacggg
ttggtcattggtggttcagcaaggaagaccgaggcagagcgactagctaaaggagttaat
ttattggtagcaacccctgggcgacttcttgatcatcttcaaaacaccaaggggtttata
tacaatcgtctaaagtgtttgacaattgatgaagctgacagaattttggaagcaaacttt
gaagaagaaatgaagcaaataattaaaattttacccaaggagaggcaagcagctcttttc
tctgctacccagactgagaaggttgccgatcttgcatgcttatccttgaaagatcctgtc
tacgttggtgtagatgatgaaaggaattgggtcactaacgaaggactggagcaaggctat
tgtgttgtgccatgtgccaagagatttattgtactctattcattcctaaagcgacatcaa
tcccagaaagtgatggttttcttttcttcagtcgactctgttaaatttcattcagaactg
ctgaagtacattcacgtggattgcttcgacattcatggacagcaaaagcagcagaaacga
actactactttctttgacttctgtaaagcagagaaaggaatgttgttgtgtaccaatgtt
gctgctcgtggtcttgatattccctctgtggactggattattcagtacgatccgccagat
gatcgtaaggaatatgtgcatagagttggtcgaacagctcgtggtgaaggttcaaaagga
aatgccctgcttttcctgacaccggaagagttgcagttcctcagccatcttaaggcagct
aaggtgcctgtaaaagagtatgaatttcctgaaaagaagctggctaatgtgcaatctcat
ctggaaaagttggtgtctaacaattattatctgaacaagtctgctaaagaagcatataga
tcttatgtattagcatacaattcacattctagcaaggacatctttaatgttcaccgcctt
gatctgcagggggtggcagcttcattttgctttgatagccctccgaaggtctgtattaac
atagacagtggtgcatccaaattcaggaatacaaaacgaaaagatggacgaagtcgaaat
ggattcagcagtagcaatccatatgggaacagaagttcaggccattga
DBGET
integrated database retrieval system
