Apium graveolens (celery): 141678401
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Entry
141678401 CDS
T11340
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141678401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141678401
04121 Ubiquitin system [BR:
agrv04121
]
141678401
03036 Chromosome and associated proteins [BR:
agrv03036
]
141678401
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141678401
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
141678401
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141678401
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
141678401
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
141678401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_2
BRCT
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4
zf-RING_2
RTT107_BRCT_5
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-RING_10
PHD_NSD
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
141678401
NCBI-ProteinID:
XP_074340812
LinkDB
All DBs
Position
8:complement(47954782..47961053)
Genome browser
AA seq
1072 aa
AA seq
DB search
MDSSSHLDKMGRELKCPICLSLLDSAVSLTCNHLFCNVCIRKSMKAASDCPVCKVPYRRR
EVRPAPHMDNLVNIYKSMEIASGANIFVSQSVPSKKLYGEDNQPEADDEVDEKIQTGSKR
KDPVNQRKLKGNWSKGYSSKSSSSDTTRPSNPTKKRIQVPQHPLPETPTQPKRLDISLGK
QTTIEPQRGAVVRKDVSHLGKKDNPDLCPFFWLQNEEDADKCTLNTVDDTVMDTPPDIPN
FSDLKDADDEVQCNMAPKNGPSVTSHKADLFDSEMFEWTQRACSPELCSSPMKMQVEETD
QHNEMEEKTTDEDIVINVDYEPNKAGIINSRRCADQIIEDRVALDFSDVDYAGTSAKATR
HKKRSKKARKCNQMKRAKLMEGNNVLRDEAEDSSQTEKVYNTCNHATLSHAKEKSIIKDK
KARPSPKGVKSSNKNSSHMLVVDLFPSVVNNDGSESIRDKQRREMQTCIDSNEVAEHSRQ
NQNVDKVSDLVNRSNSCKPKRRREKVYQDRGVTKTISENVCTSMDGVEPMQLADESMSAV
DVFVPLNEKEGISGNHKLKSSGKHKTRNSQHKRNCNTMSKLSELTTDSDAIVHQKVTALG
PGGGKRSSRNMIDSKSCEQLKYSKVNFNPADDPKLIASSDCQNIHEKKTQSSGKLSDDLP
KTNKNLLSMSGTLRKCEKRPNKIQCSFCHSVEDSEASGVMVHYLNGKPLKVGCSEAGNVI
HVHRNCAEWAPNVYFDDDVAMNLVAELARSKRIKCGCCGLKGAALGCYEKSCRRSFHVPC
AKSTPQCRWDNENFVMLCPLHASSKLPNEIAKFLSEYKKESLSRRQLPISQTKLAVNQDD
TTSFRWNSQGLSAKLVLCCSALTIAEKEIVSEFKMLSGVNVLKNWDSSVTHIIASTDENG
ACRRTLKFLMGILEGKWILSIEWVKACLKAKENVDEQQYEIDVDIHGVRGGPRQGRLKLL
NKQAKLFDGYNFYFIGDFQPSYRGYLHDLLIAAGGIVLHRKPISGSNEAVLLTYIIYSLE
LPDKCNPGNRILIINSRRTDAEKLASSCQAVVATNSWILNSIAACKLQNLAE
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcttcacacttggacaaaatgggccgtgaactcaaatgccctatctgctta
agtctactcgattccgctgtttcgctcacttgtaatcacctcttttgcaatgtatgtatt
cgaaaatcgatgaaagcggcttcggattgtccagtttgtaaggttccgtatcgacgaaga
gaggttcgtcctgctccacacatggataacttggtaaatatttacaagagtatggaaatt
gcttctggtgccaacatctttgtcagccaatccgtaccttcgaaaaagttgtatggtgaa
gataaccaacctgaagctgatgacgaggtagatgaaaaaatccaaacaggcagcaagcga
aaggatccagtgaatcagagaaagctcaaaggaaactggtcaaaagggtactcaagtaaa
agttctagttcagatactacaagaccttctaatccgacaaaaaaaaggattcaagtgcct
caacatcctcttccagagactccaacgcagccgaagaggctggacattagtttagggaaa
caaactacaattgaacctcagagaggtgcagttgtaagaaaggacgtgtctcatttaggc
aagaaagataatccggatctctgtccatttttttggctgcaaaatgaagaggatgcagac
aaatgtacgttaaatacagttgatgacactgtcatggatacacctccagatattccaaat
tttagtgaccttaaggacgctgatgatgaggtgcagtgtaatatggctcctaaaaatggc
ccgtcagttacctctcataaagctgatctttttgatagtgagatgtttgagtggacacaa
agagcttgttcccctgagctgtgttcaagtcccatgaaaatgcaggttgaagaaactgac
cagcacaatgaaatggaggaaaaaactacagatgaagacatagttataaatgtggactat
gaacctaataaagcaggaatcattaattcccgaaggtgtgcagatcagataatagaagac
agggttgctttggatttttctgatgtggactatgctggcactagtgcaaaagccacaaga
cataaaaagagaagcaagaaagcacgcaaatgcaatcaaatgaagcgagcaaagctgatg
gagggaaataatgtgcttagagatgaagctgaagatagtagtcaaacggaaaaggtttat
aatacatgcaaccatgctactttgtcgcatgcgaaggaaaagtccatcataaaagacaaa
aaggctcgtccttctccaaagggggtaaaatcttcaaacaagaatagtagccacatgctt
gttgttgacttgtttccttcagtagttaataatgacggcagtgagagcatacgagataaa
caaaggagggaaatgcaaacttgtatagattctaacgaggtagctgagcacagtcgtcaa
aatcaaaatgtggataaggtaagtgatctggtcaacagatcaaattcgtgcaaacccaaa
agaagaagagagaaagtttatcaggatcgtggtgtcacaaagacaatatccgagaatgtc
tgtacttcgatggatggggtagagcctatgcaactggctgatgagagcatgtctgctgtt
gatgtgtttgttccgctaaatgaaaaagaaggcattagtggaaaccataaattgaagagc
tctggcaaacataaaaccagaaattctcaacataaaagaaattgcaatacaatgtcaaaa
ctttcagaattgactactgattcagatgccatagttcatcaaaaagtcactgctttgggt
ccaggtggtggaaaaagatcttctaggaacatgatagactctaaaagctgtgaacaactg
aaatattctaaggttaactttaatccagctgatgatcctaagcttatagcatctagtgat
tgtcaaaatattcatgaaaagaaaactcaatcgtctgggaagctttctgatgatttgcca
aaaacgaataaaaaccttttgagcatgagtggaaccttacgcaaatgtgagaaaaggcct
aataaaattcagtgttcgttttgtcattctgtggaagactcagaggcatcaggagtcatg
gtacactaccttaatggcaaacctttgaaagttggttgtagtgaagcaggaaatgtcata
catgtgcaccggaactgtgcagaatgggcccctaatgtctattttgatgatgatgttgca
atgaacctagtagctgaattggcaagaagtaaacgaattaaatgtggttgttgtggacta
aaaggggcagcccttggctgctatgaaaagagttgtcgcagaagctttcatgttccttgt
gcaaagtcaactccacaatgtcgatgggataatgaaaactttgtcatgctatgccctctc
cacgcctcttcaaaacttccaaatgaaattgctaaatttctatcggaatataaaaaggaa
tctctttcaagaagacaactacccattagccaaacaaaattagcagtaaatcaggatgat
accacaagtttccggtggaactctcagggtttatcagcaaaattagttctctgttgttca
gctcttaccattgcggagaaggaaattgtttctgaatttaagatgctatctggagttaac
gtcttaaagaattgggattctagtgttacccatatcattgcatcaacggatgagaatgga
gcatgcagaagaacactcaagtttttgatgggcattttggaggggaagtggatactaagt
attgaatgggtcaaagcttgcctaaaggcaaaggaaaatgttgatgaacagcaatacgag
atcgatgttgacattcatggagttaggggtgggcctagacaaggaagattaaaacttctg
aacaagcaagcaaagctatttgatgggtacaatttctattttattggggactttcaacct
tcatatagagggtatctacatgatcttttaattgctgctggtggaatagttctgcacaga
aagccaatttcaggaagcaatgaagctgtattattgacatacataatttatagcctggag
ctacctgataagtgtaacccaggtaatagaatcttgattatcaacagtaggcgaactgat
gcagagaagctagcaagctcctgtcaggctgttgtggcaacaaattcatggattttaaac
tctattgctgcgtgcaagttacaaaatcttgctgaataa
DBGET
integrated database retrieval system
