Apium graveolens (celery): 141678545
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Entry
141678545 CDS
T11340
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141678545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141678545
03110 Chaperones and folding catalysts [BR:
agrv03110
]
141678545
03029 Mitochondrial biogenesis [BR:
agrv03029
]
141678545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrv04147
]
141678545
Enzymes [BR:
agrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
141678545
Messenger RNA biogenesis [BR:
agrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
141678545
Chaperones and folding catalysts [BR:
agrv03110
]
Heat shock proteins
HSP60 / Chaperonin
141678545
Mitochondrial biogenesis [BR:
agrv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
141678545
Exosome [BR:
agrv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141678545
Exosomal proteins of other body fluids (saliva and urine)
141678545
Exosomal proteins of breast cancer cells
141678545
Exosomal proteins of colorectal cancer cells
141678545
Exosomal proteins of bladder cancer cells
141678545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MCM_N
Motif
Other DBs
NCBI-GeneID:
141678545
NCBI-ProteinID:
XP_074340993
LinkDB
All DBs
Position
8:262364708..262369732
Genome browser
AA seq
662 aa
AA seq
DB search
MNQNISYMSCFVNPIPSVSYTMQPFTIRKHHPSFFKTRAMAKQLFFNHDGAATRKLLAGV
ELVAKLVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIVLEDHLENVGVKLVRQAGAK
TNDLAGDGSTTSVLLAHGLIAEGVKVIAAGMNPIQISRGIEKTSLALVSELKSMSREVED
HEIAHVAAVSAGNDPAVGKMISEALEQVGKTGVITIERGNSSDNTLQIVEGMQFDRGFLS
PYFVTDRRRMVVELQNCKLLLVDKIIKNPKEMLKILDNAVKEEYPILIVAEGIEQEALAP
VIRNKLKGVLKAAAIKAPAFGERKSHYLDDIAILTGGTVIRDEMGLTVEKAHKEMLGTTT
KVVITKDSTLIVTDGSTQAAVKKRVLQIENLVKNTKENFQKKILNERIARLSGGIAIIQV
GAQTQVEQKDKQLRIEDAVNATKAAVDEGVVVGGGCCLLRLSLKVDEIKNTLDNEEQKIG
AEIFKRALSYPARQIAKNAGVNGNVVIEKVLSIDDTRYGYNAAKDQYEDLMAAGILDPSK
VVRCCIEHAASVAKTFLTSDAVVIYIDEPAPRRRRRPMPDLSDPAPSSRRRPMPDLGDLA
PSNRRRPMPDLGDLAPSRRRRPMPDLSDLAPSSGRRPMPSLGDLASNRRRPMPNPGMGTL
GL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacatatcatacatgtcatgttttgtcaatcctataccttcagtttcttac
acaatgcaaccttttactataagaaaacatcacccttctttcttcaaaaccagagcaatg
gctaaacaacttttcttcaaccatgatggagctgctacaaggaagcttctggcaggggtg
gagctggtggcaaagctggtgggagtgacattgggccctaaaggaaggaatgtggttttg
caaaacaagtatggacctcccaagattgttaatgatggtgaaactgttcttaaacagatt
gtgctagaggatcatctggagaatgttggtgtaaagttagtgaggcaagctggtgcaaaa
acaaacgaccttgcgggtgatggatccaccacatctgtgttgcttgctcacggtctgatt
gctgagggcgtgaaggttattgctgctgggatgaatcctattcagatatcacgtggaatt
gagaaaacttctttagcccttgtttctgagcttaaatcaatgtcaagagaggttgaggat
catgagattgcacatgttgccgctgtcagtgctggtaatgatcctgctgtaggaaagatg
atttctgaagctcttgaacaagtgggaaagactggggttatcacaattgagaggggaaat
tcttctgataatacattacaaatcgtagaaggaatgcagtttgatcgcggattcttgtct
ccatactttgtcactgacagacgaagaatggttgttgaactccagaactgcaagttactt
ttggtcgacaaaatcatcaaaaacccaaaggagatgttgaaaatattggataacgcagta
aaggaggagtaccctattctgatagttgcagagggcattgagcaggaagctctggctcca
gtaataagaaacaaactcaagggagtgctgaaggcagctgccatcaaggctcctgcattt
ggcgaacgaaagagccactacttagatgacatcgctatactaactggaggtacagtaatc
agagatgagatgggtttaaccgttgaaaaggcacataaggagatgttggggactacgaca
aaggtagtaatcactaaagattctacattgattgttactgatggcagcactcaagccgca
gttaagaagagagtcttgcagatagaaaaccttgttaagaatacaaaagaaaactttcaa
aagaaaatactgaatgaaaggattgctagattatcaggaggaattgcgataattcaggta
ggtgcacaaacacaggttgagcaaaaggataaacaactgaggattgaagacgctgttaat
gcaaccaaggcggcagtagatgagggagttgtagttggtggaggctgttgtcttttaagg
ctatctttaaaagtggatgaaattaagaatactttggacaatgaagagcagaagatagga
gctgaaatattcaaaagagctttaagctatccggcaagacagatagccaaaaacgcagga
gtgaatggaaacgttgttatagagaaggttctatctattgatgatacaagatatggatat
aatgctgcgaaagaccagtatgaggatttaatggctgctggaattcttgatccgtcaaag
gtagtcagatgttgcatagagcatgcagcatcagttgcaaagacctttttaacgtctgat
gcggttgtcatatacatcgatgagccagcccccagaagaaggagaagaccaatgcccgat
ttaagtgatcccgctcccagtagcagaagacggccgatgcccgatctgggtgatctagcc
cccagcaacaggagaagacccatgcctgatttgggtgatctagcccccagcaggagaaga
agacccatgcccgatttgagtgatctagcccccagcagcgggagaagaccaatgccatct
ttgggtgatctagcctccaacaggagaagaccaatgcctaaccctggtatggggacactt
ggcctataa
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