KEGG   Apium graveolens (celery): 141678923
Entry
141678923         CDS       T11340                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
agrv  Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agrv03400]
    141678923
DNA repair and recombination proteins [BR:agrv03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    141678923
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C UBA_RAD5A zf-C3HC4_3 HIRAN zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 DEAD zf-RING_2 ResIII zf-RING_5 RING_XB3-XBAT31 zf-C3HC4_4 Prok-RING_4 zf-ANAPC11 CUE UBA_Rad5 zf-RING_4
Other DBs
NCBI-GeneID: 141678923
NCBI-ProteinID: XP_074341458
LinkDB
Position
8:complement(204630339..204637572)
AA seq 1271 aa
MEAMVVDEIDVVKKEENIKLIKSIFGSDVSDFNIKAVLVKCKNDLGAAINQILDTPSVLS
SDCGVKKTSTGARVMAQFKQEDVEECGDLKPLLEWKAEGKEEEGFGIGDECVKGVRGNVG
ERFEGKGGNECKDIVKVKEECEEGDVEMGCLDVPLVREIVDKKVCVENEGGECKELVKVK
EECEKGDVELGCEDALLVRENVDEKVCVENEGGNECKVVKVKKECDEGGFEKGTECTPCI
GENVDNAICIEDEGGSECKVVGVKVKEECQKGDVKMEGDGDKPVEEGVGENFEDEAESAY
RPIVKGMKQGGVKRNNERAIVVKKDMGEAIMVKPLSSVPAKPKMSMYDRLKFSGVKKQKV
EDNYMLSTVVIEDADFPEEEDWLLVGRTAITGLSTTRGRKLENNEIVHLAFPGRDMKAKC
SSPFIRSKTITALSGIVRFSTTRYGEIGRLPMEWGKCLIPLVNSNKVKVLCRCIAVPPTL
QLMQEILLYGSFYIHRSLFTEVTNSSWKLDAPSNIDSTIYPLLTLFKLLKIKPYQEADFT
PEELQSRKRGLNLDDESKEFAGMLPVLKRGKGCQSDHDKDEQAILESSLNKLVGAADVYN
LEEMEPPSTLMCDLRPYQKQALYWMTELEKGVDAEKATKTLHPCWAAYRLCDERASSIHV
NVFSGEATTQFPTATQTARGGILADAMGLGKTVMTISLILARPGRGIPEANHTDSENLAS
KRTKYNEVPRKARGGTLIICPMALLGQWKDELITHSKPESISVSVHYGGERSNDPEVIAE
PDVVLTTYGVLTAAYKSDPDNSIFHRVDWHRVVLDEAHTIKSSKTQAAQAAFALSSYCRW
CLTGTPLQNSLEDIYSLLCFLHVEPWCNWAWWHKLIQKPYENGDHRGLKLIKAILRPLML
RRSKDTVDKHGRPILVLPPTDIQVIECNQSEAERDFYDALFKRSKVQFDQFVAQGKVLHN
YANILELLLRLRQCCNHPFLVMSRGDSQEYTDLNKLAKRFLETNPDSANPSQVPSRAYIE
EVVDGIRRGDNTECPICLESADDPVLTPCAHRMCRECLLSSWRTPAAGQCPICRQILNKN
ELITCPSENRFRIDVDKNWTESSKVSHLLDCLEKIRSQKSGDKSIIFSQWTSFLDLLEIP
LKRRNIMFLRFDGRLSQKQREKVLKEFSETNVKMVMLMSLKVGGVGLNLTSASNVFLMDP
WWNPAVEEQAIMRIHRIGQKKTVRVRRFIVKETVEDRMQQVQARKQRMIAGALTDEEVRS
ARIDELKMLFR
NT seq 3816 nt   +upstreamnt  +downstreamnt
atggaagcaatggttgtagatgaaattgatgtagtaaaaaaagaggagaatattaagtta
attaaatctatttttgggtcagatgtgtctgattttaatattaaggctgtgttggtgaag
tgtaagaatgatctgggtgcggcgattaatcagattcttgacactccttcggttttgtct
tcggattgtggcgttaagaagacgagtactggggctcgtgtaatggcgcaatttaagcaa
gaggatgttgaggagtgtggagatctgaaaccccttttggagtggaaggctgagggtaag
gaggaagagggttttgggattggggatgaatgcgtgaaaggtgttcgaggaaatgtcggt
gagaggtttgagggtaaggggggaaatgagtgtaaggatattgtgaaggtgaaggaggaa
tgtgaagagggtgatgttgaaatggggtgtttggatgtaccgcttgttcgagaaattgtt
gataagaaagtttgtgttgagaatgaggggggagagtgtaaggagttagttaaagtgaag
gaagaatgtgaaaagggtgatgttgaactgggatgtgaggatgcactgcttgttcgagaa
aatgttgatgagaaagtttgtgttgagaatgaggggggaaatgagtgtaaggttgttaag
gtgaagaaagaatgtgatgaggggggttttgaaaaggggactgagtgtacaccgtgtatt
ggagaaaatgttgataatgcaatttgtattgaagatgagggggggagtgaatgtaaggtt
gttggagttaaggtgaaggaagaatgtcaaaagggtgatgttaagatggagggtgacggc
gacaaacctgttgaggaaggtgtcggtgagaattttgaggacgaggcagagagtgcgtat
aggcctattgttaaggggatgaaacagggtggtgtgaagcggaacaatgagagagctatt
gttgtgaagaaagatatgggggaggcgattatggttaagcccttgtcttcggtgcccgca
aagccgaagatgtctatgtatgataggttgaagttttctggtgtgaagaagcagaaagtg
gaggataattatatgttgagtactgttgtgatcgaggatgctgattttcctgaagaggag
gattggttgcttgtggggaggactgcaattactgggctttcgacaactagagggagaaag
ttggagaacaatgagattgttcacttggcctttcctggaagagacatgaaagctaagtgt
agttcaccatttattcggtctaagacaatcactgccttgtcggggattgttcgtttttca
accacaagatatggagagattggtcgtcttccaatggagtggggaaagtgcctcattcca
cttgttaactctaacaaggtgaaagttctttgtcggtgcatagctgttcctccaactctg
cagctgatgcaagaaatattattatatgggagcttttatatccatcgttcgcttttcaca
gaagtcaccaactcatcctggaagctcgatgctccttccaatattgactcaacaatttat
cctcttttaactctgttcaagttgctaaaaataaaaccatatcaggaggctgattttacc
ccggaggagcttcaatcaagaaaacgtggtttgaatttagatgatgaatcaaaagaattt
gctggaatgttgcctgtgctgaaacgaggtaaaggttgccaatcagatcatgacaaagac
gaacaagctatactggaatcatctttaaacaagcttgttggtgctgcagatgtgtataat
ttggaggagatggaacccccaagtactcttatgtgtgacttaagaccgtaccagaagcaa
gcactttactggatgacagagttggagaagggagttgatgccgagaaagcaacaaaaaca
ctccatccctgctgggcggcatatcgcttatgtgatgagagggcttcttccattcatgtg
aatgtgttctctggtgaagcaacaactcaattccctactgccacacaaactgccagagga
ggaattttagcagatgcaatggggctgggaaaaactgtaatgacaataagtcttatactg
gcaagacctggaaggggaatccctgaagccaatcatactgactcagaaaatctagcctca
aagagaacaaaatataatgaagtaccaagaaaagcaagaggtggaactcttatcatatgt
cctatggcattgctaggacagtggaaggatgagcttattacccattccaagccagaaagt
atttccgtatctgttcactatggtggtgaaagaagtaatgaccctgaggtcatagcagaa
cctgatgtggttttaacaacttatggtgtcctaactgcagcttataaaagtgatccagac
aacagcatttttcatagagttgactggcaccgggtggtgttggatgaagctcataccata
aaatcctcaaagactcaagctgcacaggcagcctttgcattatcctcatattgcaggtgg
tgtctcactggtacacctcttcagaatagcttggaagacatctatagtctattatgcttt
ttgcatgttgagccatggtgcaactgggcatggtggcacaagttaattcagaaaccctat
gaaaatggtgatcaccgggggcttaaactgataaaagctattctgaggccattaatgtta
aggagaagtaaagatactgtggacaaacatggaaggccaattcttgttctgccaccaact
gacattcaagtcatcgagtgcaaccaatcagaggctgaacgtgatttttatgatgctctc
tttaagagatccaaagttcaatttgaccaatttgtggcacaaggaaaagttcttcacaat
tatgcaaatatccttgagttgctacttcggttgaggcagtgttgcaaccacccatttctt
gttatgagccgaggtgattcccaggagtacacagacttgaataagcttgctaagagattt
cttgaaactaatcctgattctgcaaatccaagtcaagttccttctcgagcgtatattgaa
gaggttgttgatggtatcaggcggggtgataacacagagtgtcctatatgcctggagtct
gcagatgaccccgtgctcacaccatgtgcacaccgaatgtgcagggaatgccttctctct
agctggcgaactcctgctgctggacagtgcccaatatgccgtcagatactgaacaaaaat
gaactcattacatgcccatctgagaaccggtttcgaattgatgttgataagaattggaca
gagtcttccaaggtgtcacatctcttagattgcttggaaaaaattaggtctcaaaagtct
ggtgataaaagcatcatttttagccaatggacttcctttttggacctcttggaaattcct
ctgaagaggagaaacattatgttcttgaggtttgatggaagattgtcacagaaacaaaga
gagaaggttttgaaggagtttagtgagactaatgtaaaaatggtgatgttaatgtcacta
aaagtcggtggagtgggcttgaatttgacttcagcatctaatgtctttctcatggatcct
tggtggaatcctgcagtagaagagcaagcaatcatgcgtatacatcgcattggtcaaaag
aaaacagtccgtgttagaaggttcattgttaaggaaacggtggaggatcgaatgcagcaa
gttcaagcgagaaaacaaaggatgattgctggagccttaactgatgaagaagtccgatca
gccagaattgatgaactcaaaatgctgtttagatga

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