Apium graveolens (celery): 141679074
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Entry
141679074 CDS
T11340
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141679074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141679074
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
141679074
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
141679074
NCBI-ProteinID:
XP_074341657
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Position
8:complement(6138666..6141359)
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AA seq
219 aa
AA seq
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MDNSQLINNTHVSSTSTDDGSEVEPIKIYGLSNYYFYSKPAPPLKNQTLEERVCCLKTRY
DVYGMRTCVEAVILVELSNTPHLLLFQVRNSTYKLPGGRLRPGESDIEGLKRKLTNKLYV
QCDGFVPDWKVGECLGKWWRLGFETLLLPYLPPNVRSPKECRKIFLVKLPVMQNFTVPKT
HKLLVVPLSKLHENHEIYGPVISGVPQLLSKFPIEIVNS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcacagcttataaacaacactcatgttagttcaactagcactgatgatggg
tctgaagtagaaccaataaaaatatacgggctcagcaattattatttttattccaagcca
gctcctcctttgaaaaaccaaaccttagaggaacgtgtctgctgtcttaagaccaggtat
gatgtttatgggatgaggacttgtgtggaagctgtgattctggttgagctctccaatact
ccccatttattgttgtttcaagtaaggaactccacatataagcttccaggtggtcgttta
cgaccaggtgaatcagatatcgaaggcttgaagcgtaagcttacaaacaagctatatgtt
cagtgtgatggttttgttcctgactggaaggtaggagaatgccttggtaagtggtggaga
cttggcttcgagacattgttgttaccatacttgccacctaatgtcagaagtcccaaggaa
tgcagaaaaatctttcttgtgaagttgccggttatgcaaaatttcaccgtaccgaaaacc
cacaagttgcttgtggttcctttgtccaaacttcacgaaaaccacgaaatctatggaccg
gtaatatcaggagttccccagctgttatcaaaattccctattgaaattgtgaatagttaa
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