Apium graveolens (celery): 141679730
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Entry
141679730 CDS
T11340
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141679730
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agrv01009
]
141679730
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141679730
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141679730
03041 Spliceosome [BR:
agrv03041
]
141679730
Enzymes [BR:
agrv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141679730
Protein phosphatases and associated proteins [BR:
agrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
141679730
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141679730
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141679730
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141679730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141679730
NCBI-ProteinID:
XP_074342249
LinkDB
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Position
8:85934815..85935756
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AA seq
252 aa
AA seq
DB search
CISGDIHGQYSDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSLERIWLLLAYKIKYSDNFF
LLRGNHECASINRIYIFYDECKRRFNVKLWKTFTDCFNCLPVAVVVDDKILCMYGGLSPD
LNNLDQIKNLPRPTAIPDTGLLCDLLWSDPSNDVKGWGLNDRGVSFTFGLDKMSEFLAKH
DLDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDGNLMCSFQVLKPT
EKKNNFLMSTKM
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
tgcatttcaggtgacatccatgggcagtatagtgatttgttacgactctttgaatatggt
ggctttcctcctcaatcaaattatctgtttttaggggattatgtggaccgtggaaaacaa
agtttagaaaggatatggctcttgcttgcttataaaattaagtattcggataactttttt
cttcttaggggaaaccatgaatgcgcctctatcaatagaatatatatattttatgatgaa
tgtaagcgccgattcaatgttaaactatggaaaacctttactgactgtttcaactgtctt
cctgtggctgttgttgttgacgataagatattgtgcatgtatggtggtctgtcccctgat
cttaacaatttggatcagatcaaaaacctgccacgtccaactgctatacctgacacaggt
ttgctctgtgatttactttggtcagatcccagtaatgatgtcaagggatggggattgaat
gatagaggagtatcattcacctttggccttgataagatgtcagagttcttagcgaagcat
gacttggaccttgtttgtcgtgctcatcaggttgtggaggatggttatgaattctttgct
gaaagacagcttgttaccatattttccgctcccaactattgcggtgaatttgataatgct
ggtgcaatgatgagcgttgatggaaatttgatgtgctctttccaagtactgaagccaact
gaaaaaaagaataattttttaatgtccacaaaaatgtaa
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