Apium graveolens (celery): 141679819
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Entry
141679819 CDS
T11340
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03030
DNA replication
agrv03420
Nucleotide excision repair
agrv03430
Mismatch repair
agrv03440
Homologous recombination
agrv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141679819
03420 Nucleotide excision repair
141679819
03430 Mismatch repair
141679819
03440 Homologous recombination
141679819
03460 Fanconi anemia pathway
141679819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141679819
03032 DNA replication proteins [BR:
agrv03032
]
141679819
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141679819
Transcription factors [BR:
agrv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141679819
DNA replication proteins [BR:
agrv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141679819
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141679819
MMR (mismatch excision repair)
141679819
DSBR (double strand breaks repair)
HR (homologous recombination)
141679819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
DUF8041
Motif
Other DBs
NCBI-GeneID:
141679819
NCBI-ProteinID:
XP_074342308
LinkDB
All DBs
Position
8:complement(6326132..6330070)
Genome browser
AA seq
621 aa
AA seq
DB search
MPVNLTPNAISAINAGDLNAKPLVQVLEIRPIGTQRRYRLIISDGVMTQHAMLASQLNEQ
VTTGRVVVGSVVQLINYNCNTINNRKIIVVLTMETIIPECEIIGNPKYVPEPDSAAQKPM
PNVTSGSTIPSMRNNYSGLSAPNSNTQGYRPTVQPAYQPPPNYRNQGTVMKNEAPARIIP
IAALNPYQGRWAIKARVTAKGDLRRYNNSKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
YDIIEVGKVYVISKGSLKPAKKNFNHLKNEWEIFLEATSTVDLCPDEDASIPQQQFSFRP
ISEIENAENDSILDVIGVVVSVNPSVPILRKNGMETQRRILKLKDQSGRSVELTMWGEFC
NKEGQKLQEMIDSGFFPVVAIKAGKVSDFSGKSIGTISSSQLFINPDSPEAINLRQWFDR
GGKDLASQSISKDIVPGASRNEIRKTVSQIKDEGLGRSDKPDWVTVKAYITFIKTDNFCY
TACPLMIGDRQCNKKVTRSGSRWQCDRCNQEFDECDYRYLLQLQVQDHSGLTWMTAFQES
GEEILGCSAKELYLLKHEQQDDERFAQSMLKGLFRQFMLKLKIKEELYGDEQKLKITVVK
AEKVNYVAETRYLLDLIPKSR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaatctgacaccgaacgcaatctcggcgattaacgccggagatttgaacgcc
aagccactcgttcaagtcttagagatcaggcccatcggtactcagcggcgttaccgttta
ataatatccgatggcgtgatgactcagcacgcaatgctggcaagtcagctcaatgaacaa
gtcacaaccggtcgagttgtagttggatctgttgttcagttaatcaattataactgtaac
accattaataatcgaaagattatagttgttctgaccatggaaacgattataccagaatgt
gagataatcgggaacccaaaatatgttcctgaacctgattcagcagctcaaaaaccgatg
cctaatgtaacctctggaagcacaattccaagtatgcgaaataactatagtggcctgagt
gcaccaaatagtaatacacagggctaccgtccaactgttcagcctgcatatcagccacct
ccaaattacaggaaccaagggacagtcatgaaaaatgaagcacctgcccgcattattcct
atcgctgctttaaatccttaccagggtcgatgggctatcaaagcaagagttactgctaaa
ggagaccttagacgctacaacaattcaaagggggatgggaaagtcttttcttttgatctg
cttgactctgatgggggagaaatacgcgtgacctgctttaatgccgttgttgaccggttt
tatgatatcattgaggtgggaaaagtatatgtgatatcaaaaggcagcttaaaacctgca
aaaaagaacttcaaccaccttaaaaatgaatgggagatatttttggaggccacttctact
gtggatctttgtcctgatgaagatgcttcaataccacaacagcagttctcctttagacct
attagtgaaattgaaaatgctgagaatgattctattttagatgttataggtgttgtggta
tctgtgaacccttctgtgccaatcttgagaaagaatggcatggaaactcaaagaagaatt
ctgaagttgaaggaccaatctggaaggagtgtggagttgactatgtggggtgaattttgc
aacaaggaaggtcaaaagctgcaagaaatgattgattctggattttttcctgttgtagca
ataaaggctgggaaagttagtgacttcagtggcaagtccattgggactatttcttctagc
cagctctttataaatccagattctccagaagctatcaacttgagacagtggtttgatcga
ggtggaaaagatcttgcttctcagtccatttctaaagacatagtgcctggtgcatcgaga
aatgagatacgtaagactgtgtcacagattaaggatgaaggtctcggtagatcagataag
ccagattgggtcacagtgaaggcatatatcacttttattaagacagataatttctgctac
acagcttgcccattaatgattggggacagacagtgtaataagaaagtgactcggtcaggc
tctagatggcaatgtgacaggtgtaatcaagaatttgatgagtgtgattacagatacctt
cttcagctccaggttcaggatcactctgggttaacatggatgactgctttccaggaatcc
ggtgaagaaattttaggctgttcagcaaaagagttgtatttgcttaaacatgaacagcag
gatgatgagcggtttgcacaaagtatgttgaagggtctttttagacaattcatgttgaag
ctcaaaatcaaggaggaattatatggcgatgagcagaagttgaaaataacagttgtcaaa
gcagagaaggtcaattatgttgctgaaactagataccttcttgatttgattccaaagtct
cgctaa
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