Apium graveolens (celery): 141681028
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Entry
141681028 CDS
T11340
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
141681028
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
agrv01001
]
141681028
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agrv04131
]
141681028
Enzymes [BR:
agrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
141681028
Protein kinases [BR:
agrv01001
]
Serine/threonine kinases: Other
VPS15 family
141681028
Membrane trafficking [BR:
agrv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
141681028
Autophagy
Autophagosome formation proteins
PI3K complex
141681028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
HEAT
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
PK_Tyr_Ser-Thr
Beta-prop_EML_2
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
HEAT_EZ
PEP5_VPS11_N
Beta-prop_EML
TCAD9
APH
Beta-prop_WDR41
Beta-prop_Vps41
Cohesin_HEAT
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
141681028
NCBI-ProteinID:
XP_074343193
LinkDB
All DBs
Position
8:9830605..9841556
Genome browser
AA seq
1550 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSSYNLVLKEVLGRGRFLKSILCKHDEGLVLVKVYFKRG
DSIDLKEYERDLSSIRHVFNGLEQPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAYQLLYAVKQSHENGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEMQVSHEAPLRPSMDIFAAGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQHLEKIPDSGLRKMILHMIQLDPDSRCSAESYLQSYAGVVFP
CYFSPFLHKFYSLLNPYNSDSRVLICQLSFHEILKQMMSTKAGEEAGLDLTLTSNPLNAE
SSRQIEAKHSVDPTTSFRKTELEKGSIHGRFELPGDITTLLKDVKQSSSYFGAKTGQENF
SSSISFQVHEKCSMPVPDNLLQNISNVFKRNHHPFLKKITMNDMNSLLSDYDNQSDTFGM
PFLPLPQDSMSCEGMVLIASLLCSCIRNVKLPHMRRGAILLLKSCSLYIDDEDRLQRVLP
YVIAMLSDPAAIVRSAALETVCDILPLIRDFPPSDAKIFPEYILPMLSMLPDDPEESVRI
CYSSNISKLALTAYGFLIHSISLSEAGVLNESALGSKSLTRSSEISGRLQSKNRDTQLAH
LRKSIAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQKQSNDVLLPILPAFLNDRDEL
LRSVFYGQIIYVCFFVGQRSVEEYLLPYIEQALGDATEAVIVNALDCLTILCKSRFLRKR
ILLEMIEHAFPLLCYPSQWVRRSAVAFIAASSDNLGAVDSYVFLVPVIRPFLRRQPASLV
SEKAFLSCLNPPVSRQVFYQLLENSRSSDMLERQRKIWYSSSAQSKEWESLDLFQRGTGE
LDSVKYWPDKQQDVQGSKSVRNAIQNLDHSEDSNKARLRPIGSFIHSTSGSVVARDPLFS
DKLQFSGFMSPQINEVNSLSSDKPSEGIPLYYFKYDSNRGAGIGPATDSPSPLSSLGFGS
SSMPWMDVGTKSFSLGSSFPPPKLVSGSISIGNSSPQLHRVVHEVEDRETEQAAYVNKFQ
DMGVSVPVKGGSSVSKDISAAAEVTGLPPFARTPATQDAGWRPRGVLVAHLQEHRSAVND
IAISTDQNFFVSASDDSTVKVWDSRKLEKDISFRSRLTYSLGGSRALCTAMLQGSAQVIV
GASDGMIHMFSVDHISRGLGNVVEKYSGIVDVKKKSVGEGSITSLVNYSADDSASKMILF
STQNCGIHLWDIRTSKDAWTYKVFPVEGYVSSLITSPCGNWFVSGSSRGVLTLWDLRFCI
PVNSWQFSPACPVENMCLFVPSVNSSISTLARPLVYIAAGCNEVSLWNAENGSCHQILRV
ANNDHDSETSDLPWALTRPSSKSNCKADFRRNVNPKYKVDELNEPPPRLPGIRALLPLPG
GDLLTGGTDLKIRRWEHYSPDQSYCICGPTIKGVANDDFYETKSSFGVQVVQEAKRRPLA
TKLTGKAVLAAAATDSAGCHRDSILSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaaaatcgcacgcacaacacaagcatcagcgacagagtattatctccacgac
ttgccttcttcgtataatttagtgctcaaagaagtgcttggccgcggaaggtttttaaaa
tcgattttgtgtaaacacgatgaaggtttggtgttagttaaggtttattttaagcgcggt
gattcgattgatcttaaggagtatgagcgtgatctttcgagtattcgccatgtgtttaac
ggtcttgagcagcctcatgtttggccttttcagttttggcttgaaacggataaagctgct
tatctcttgagacaatacttcttcaataatcttcatgatcgtttgagtacacgacctttc
ttgagtctagttgagaaaaagtggttggcttatcagttgctctatgcggtaaaacagagc
catgagaatggggtttgtcatggggatatcaagtgtgagaatgtgttggtcacttcttgg
aattggctttaccttgctgactttgcttctttcaaacctacatatattccacatgatgac
ccttcagatttctctttcttctttgacaccgggggaagaaggcgttgttatctagcacca
gagagattttatgagcatggaggtgagatgcaagtttcacatgaagcacctttgaggcca
tccatggacatatttgctgcagggtgtgttattgctgagcttttcctcgagggacaacca
ctatttgaattgtcccaactacttgcttatcgcagaggtcaatatgatccaagccaacat
ctggagaagatcccagattcaggtttgcgcaagatgattcttcatatgattcaactggat
ccagactctcgatgctcagctgagagctacttgcagagctatgctggtgttgtcttccca
tgctacttttcaccatttttacacaaattctattcgctgctaaatccatacaattctgat
tctagggttctaatatgccagctctcctttcatgagatactcaagcaaatgatgagcact
aaagcaggcgaggaggctggtttggatctaacattaacctcaaaccctttaaatgctgaa
tcctctagacagattgaggcgaagcatagtgtggatccgacaacctccttcaggaaaaca
gaattggaaaagggatcgattcatggtagatttgagcttcctggagatatcactacactt
cttaaggatgtaaaacaaagtagcagttattttggtgcaaagacggggcaggagaatttt
tctagttcaataagttttcaggtgcatgaaaagtgtagcatgccagttcctgataatctc
ttacaaaatatatcaaatgtatttaagaggaatcaccatcccttccttaaaaagattacg
atgaatgatatgaattctcttttgtctgattatgataaccagtcagatacctttggaatg
cctttcttaccattacctcaagatagtatgagttgtgaaggtatggttttgattgcttca
ctgctctgttcctgtattcgcaatgtcaagttgccccatatgaggaggggtgctatactc
ttactgaagtcatgttctttatatattgatgacgaagataggttacagcgcgtgcttccg
tatgtaattgcaatgctttctgatccagctgccatcgtacgttctgccgccttggagact
gtgtgtgacattttgcctttaatacgagatttcccccccagtgatgctaaaatctttcca
gagtatattctgccaatgctttccatgcttcctgatgatccggaggaaagtgtacggata
tgttactctagtaatatatccaagcttgcattaacagcttatgggtttttaattcactca
ataagcttgagtgaggcaggggtccttaatgaatcagctttgggatccaagtcactaaca
cggtcttctgagatatctggaagattgcagagtaaaaatagagatacgcagcttgcacat
ttgagaaaatccatagccgaggtcattcaagaactagtaatgggtccaaagcaaactcca
aatattaggagagcactcttgcaggatataggcaacctctgctggttctttggacagaaa
cagagtaacgatgtcttgttacctattctcccagcttttttaaatgatcgagatgagctg
ctcaggtcagtattctatggacagatcatttacgtctgcttctttgtgggccaaagaagt
gttgaggaatatctgttgccatacattgaacaggccttaggtgatgcaactgaggctgtt
atcgtcaatgctttagattgcttgacaattttgtgtaaaagcagatttctgcggaaaagg
atactccttgagatgatagaacatgcttttccattgttgtgttatcccagtcaatgggtg
aggaggtctgcggttgcttttattgctgctagcagtgataacttgggtgcagtagattcc
tatgttttcctggtccctgtaatacgtccttttcttcgaagacaaccagcatctttagtc
tcagaaaaagcttttctttcgtgtcttaaccctccagtctcaagacaggtattttaccaa
ctcttagaaaattcgaggagttctgacatgttagagaggcagagaaagatatggtatagt
tcatcagcgcagtccaaagaatgggaatctcttgatttgtttcaaagagggacgggagaa
ttagactcagtgaagtactggccggacaagcaacaagatgttcagggttctaaatcagtt
cgaaatgctatacaaaacctggatcatagtgaagacagtaataaagctagattgaggcct
attggaagttttattcacagtacatctggcagcgttgttgcacgggatcccttgttttca
gacaaattacagttttctggtttcatgtctccacaaataaatgaagtgaacagcctcagt
tctgataaaccatcagaaggaatacctttgtactattttaaatacgacagtaatcgggga
gctggaattggtccagccactgattctccatcaccattgagctctttaggttttggttca
tcatcgatgccctggatggatgtaggaactaagtcttttagtttaggtagctcatttcca
cctcctaagcttgtttcaggttcaatcagcattgggaatagttctccacaacttcacaga
gtggtgcatgaggtagaagacagggaaacagagcaagcagcctatgttaataaatttcaa
gatatgggagtgtctgttcctgtgaaagggggttcttccgtttccaaggatatctcagct
gcagctgaagtgacaggactacctccctttgcaagaacaccagcaactcaagatgcaggc
tggaggcctcgcggtgtgttggttgcccacctccaagaacaccgttcggctgtcaatgat
attgccatctcaactgaccagaacttttttgtaagtgcatcagatgattccaccgtaaag
gtatgggattctagaaagttggagaaggacatctcatttaggtcaaggcttacttattct
ctaggcggaagccgggcactatgtactgcaatgctccaaggttcagctcaagtcatcgtt
ggagcttctgacggcatgatacatatgttttctgttgatcacatttccagggggcttgga
aatgtggtagagaagtattcaggcatagttgatgttaaaaagaagagtgttggagaaggt
tccataactagcttagttaactactctgcagatgacagtgcctctaaaatgattcttttt
agtacccaaaattgtgggattcatctctgggacattagaacaagtaaagatgcatggact
tataaagtttttcctgtagaaggctatgtttcgtctttgataacatccccatgtgggaat
tggtttgtttccgggtcttccaggggtgtgcttactctttgggatcttcggttctgtatt
cctgttaactcatggcagttttctccagcttgcccagtagaaaacatgtgtctttttgtc
ccttctgtaaattcttccatatccactctagccaggccccttgtatatatcgcagcaggt
tgtaatgaagtttctctctggaatgccgaaaatgggagctgtcatcagatcttgagggtg
gctaataacgaccatgatagtgaaacatctgatctaccttgggccttgactagaccttcc
agcaagtcaaactgtaaagcagattttagaaggaatgttaatcctaagtataaagtagat
gagctgaatgaacctcctccgcggttgcctggtatccgtgcgttactcccattaccaggt
ggagatctgttaacggggggtacagatttgaaaattcgtcgatgggaacattacagccct
gatcaaagttattgcatttgtggaccaactataaagggagttgctaatgatgatttttac
gaaacaaaatccagttttggggtgcaagttgtccaggaggcaaagagacggcctttagca
actaagttgacaggaaaggcagttcttgcagctgctgctactgattctgctggttgtcat
cgtgactctatcctttctttggcttcagtcaaattgaaccagagacttctgatatcgagc
agcagagatggagccatcaaggtttggaagtaa
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integrated database retrieval system
