Apium graveolens (celery): 141683488
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Entry
141683488 CDS
T11340
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03013
Nucleocytoplasmic transport
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141683488
09122 Translation
03013 Nucleocytoplasmic transport
141683488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141683488
03041 Spliceosome [BR:
agrv03041
]
141683488
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
141683488
Spliceosome [BR:
agrv03041
]
Complex C
Other components
EJC/TREX
141683488
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141683488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
141683488
NCBI-ProteinID:
XP_074344327
LinkDB
All DBs
Position
9
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AA seq
606 aa
AA seq
DB search
MDLFRNAILEPGSPQDFALQLVQDAIKPQRQTKLVQDENQLLENILRTLLQELVSSAVQT
GENIMQYGQSISDEASSEGQIPRILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKD
VFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDTPDGISIDFNFYKTFWGLQEHFSNPASLIHAPSKWHKFN
SSLMVVLNTFEAQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHVLVQC
LILFDYLKAPGKSEKDLFSETVKDEIKSCEERVKKLLMMTPPKGNEFLHSIEHILERERN
WVWWKRDGCPPFEKQPIDKKSAQDGARKRKPRWRLGNKQLSQLWKWAEDNRDALTDSQRV
RTPDITEYWKPLAEDMDEAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSKFTEYGIEG
VVPLDLLPSEVRSKYQAKPSDRSKRIKKEETKSSANQVEENQNATPASEIEGEGSKGDLE
ASAAQMETDTATGNISQSGTPTPEDQQKQSSDTDGQEAGQIEADAEVEPEVVDGETDADV
DMVATV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggatttattcaggaacgcaatattggaaccaggttctcctcaagatttcgcacttcaa
ttagttcaggacgctattaaacctcagaggcaaacaaagctagtccaagatgaaaatcag
ttattggagaatattttacggacactgcttcaggaactggtgtcgtctgcagttcagacg
ggggagaatattatgcagtatggtcaatcaatttctgatgaggcatcctcggagggccaa
attccacgaattcttgacattgtgctatatctttgtgagaaagagcacattgagggtggt
atgatattccagctactggaagatttgacagagatgtctacaatgagaaattgcaaagat
gtatttggctatatagagagtaaacaagacatactggggaagccagaactttttgctcgg
ggtaaacttgttatgttgagaacatgcaatcaacttcttcgccgactgtcgaaggcaaat
gatgtggtattttgtggacgaattataatgtttcttgctcatttcttcccattgtcggag
cgttcagcggtgaatataaagggagttttcaacacttcaaatgagacaaagtatgagaaa
gatactcctgatggtatttctattgatttcaatttttacaaaacattttggggtttacag
gaacatttttcgaaccctgcctccttaattcatgctcctagcaagtggcataaatttaat
tcttctttgatggttgttctgaatacctttgaggctcagccattgagtgatgaagagggt
aatgctaataaccttgaggatgaggcggctacctttaatataaaatatcttaccagtagt
aaactgatgggcctagagttaaaagattcaagctttcgtcgtcacgttctagttcagtgc
ctcatattgtttgattatctgaaggctccagggaagagcgagaaagatttgttttctgaa
acagtgaaggatgaaataaaatcttgtgaggagcgggtgaagaagcttcttatgatgact
ccacccaaggggaatgaatttcttcacagtattgaacatatacttgaacgtgaaaggaat
tgggtatggtggaaacgtgatggttgccctccatttgaaaagcaaccaatagataaaaaa
tcagctcaagatggagccagaaaacgaaagccaaggtggagacttgggaacaagcaactt
tctcaattgtggaagtgggctgaagataatcgggatgcactgactgactcacaacgtgtg
cgcactcctgatatcacagagtattggaaacccttggctgaagatatggacgaagcagct
ggaatagaagcagagtaccaccacaaaaataaccgggtttattgttggaaaggtcttcga
ttttcagcaagacaggacttggaaggtttttctaaattcacagaatatggtattgaaggt
gttgtgcctctagatcttctgccatctgaagtacgatcaaaatatcaagctaaaccaagt
gataggtctaagcgcatcaaaaaggaagaaacaaaaagttcagcaaatcaagttgaagag
aatcagaatgcaacccctgcaagtgagattgaaggtgaaggaagcaaaggggatcttgaa
gcctcagcagctcaaatggaaactgacactgcaactggaaatatatctcaaagcggaact
ccaacgccagaggatcaacagaaacaaagctccgacacagatggtcaagaggcgggacag
atagaagctgatgctgaggtagaacctgaggttgtagatggagagacggatgcagatgtt
gatatggttgcaacagtttga
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