KEGG   Apium graveolens (celery): 141683488
Entry
141683488         CDS       T11340                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03013  Nucleocytoplasmic transport
agrv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141683488
  09122 Translation
   03013 Nucleocytoplasmic transport
    141683488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agrv03019]
    141683488
   03041 Spliceosome [BR:agrv03041]
    141683488
Messenger RNA biogenesis [BR:agrv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     141683488
Spliceosome [BR:agrv03041]
 Complex C
  Other components
   EJC/TREX
    141683488
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    141683488
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 141683488
NCBI-ProteinID: XP_074344327
LinkDB
Position
9
AA seq 606 aa
MDLFRNAILEPGSPQDFALQLVQDAIKPQRQTKLVQDENQLLENILRTLLQELVSSAVQT
GENIMQYGQSISDEASSEGQIPRILDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKD
VFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDTPDGISIDFNFYKTFWGLQEHFSNPASLIHAPSKWHKFN
SSLMVVLNTFEAQPLSDEEGNANNLEDEAATFNIKYLTSSKLMGLELKDSSFRRHVLVQC
LILFDYLKAPGKSEKDLFSETVKDEIKSCEERVKKLLMMTPPKGNEFLHSIEHILERERN
WVWWKRDGCPPFEKQPIDKKSAQDGARKRKPRWRLGNKQLSQLWKWAEDNRDALTDSQRV
RTPDITEYWKPLAEDMDEAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSKFTEYGIEG
VVPLDLLPSEVRSKYQAKPSDRSKRIKKEETKSSANQVEENQNATPASEIEGEGSKGDLE
ASAAQMETDTATGNISQSGTPTPEDQQKQSSDTDGQEAGQIEADAEVEPEVVDGETDADV
DMVATV
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggatttattcaggaacgcaatattggaaccaggttctcctcaagatttcgcacttcaa
ttagttcaggacgctattaaacctcagaggcaaacaaagctagtccaagatgaaaatcag
ttattggagaatattttacggacactgcttcaggaactggtgtcgtctgcagttcagacg
ggggagaatattatgcagtatggtcaatcaatttctgatgaggcatcctcggagggccaa
attccacgaattcttgacattgtgctatatctttgtgagaaagagcacattgagggtggt
atgatattccagctactggaagatttgacagagatgtctacaatgagaaattgcaaagat
gtatttggctatatagagagtaaacaagacatactggggaagccagaactttttgctcgg
ggtaaacttgttatgttgagaacatgcaatcaacttcttcgccgactgtcgaaggcaaat
gatgtggtattttgtggacgaattataatgtttcttgctcatttcttcccattgtcggag
cgttcagcggtgaatataaagggagttttcaacacttcaaatgagacaaagtatgagaaa
gatactcctgatggtatttctattgatttcaatttttacaaaacattttggggtttacag
gaacatttttcgaaccctgcctccttaattcatgctcctagcaagtggcataaatttaat
tcttctttgatggttgttctgaatacctttgaggctcagccattgagtgatgaagagggt
aatgctaataaccttgaggatgaggcggctacctttaatataaaatatcttaccagtagt
aaactgatgggcctagagttaaaagattcaagctttcgtcgtcacgttctagttcagtgc
ctcatattgtttgattatctgaaggctccagggaagagcgagaaagatttgttttctgaa
acagtgaaggatgaaataaaatcttgtgaggagcgggtgaagaagcttcttatgatgact
ccacccaaggggaatgaatttcttcacagtattgaacatatacttgaacgtgaaaggaat
tgggtatggtggaaacgtgatggttgccctccatttgaaaagcaaccaatagataaaaaa
tcagctcaagatggagccagaaaacgaaagccaaggtggagacttgggaacaagcaactt
tctcaattgtggaagtgggctgaagataatcgggatgcactgactgactcacaacgtgtg
cgcactcctgatatcacagagtattggaaacccttggctgaagatatggacgaagcagct
ggaatagaagcagagtaccaccacaaaaataaccgggtttattgttggaaaggtcttcga
ttttcagcaagacaggacttggaaggtttttctaaattcacagaatatggtattgaaggt
gttgtgcctctagatcttctgccatctgaagtacgatcaaaatatcaagctaaaccaagt
gataggtctaagcgcatcaaaaaggaagaaacaaaaagttcagcaaatcaagttgaagag
aatcagaatgcaacccctgcaagtgagattgaaggtgaaggaagcaaaggggatcttgaa
gcctcagcagctcaaatggaaactgacactgcaactggaaatatatctcaaagcggaact
ccaacgccagaggatcaacagaaacaaagctccgacacagatggtcaagaggcgggacag
atagaagctgatgctgaggtagaacctgaggttgtagatggagagacggatgcagatgtt
gatatggttgcaacagtttga

DBGET integrated database retrieval system