KEGG   Apium graveolens (celery): 141683669
Entry
141683669         CDS       T11340                                 
Name
(RefSeq) squalene synthase 2 isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv00100  Steroid biosynthesis
agrv00909  Sesquiterpenoid and triterpenoid biosynthesis
agrv01100  Metabolic pathways
agrv01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    141683669
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    141683669
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:agrv01006]
    141683669
Enzymes [BR:agrv01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     141683669
Prenyltransferases [BR:agrv01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   141683669
SSDB
Motif
Pfam: SQS_PSY CUX1_N
Other DBs
NCBI-GeneID: 141683669
NCBI-ProteinID: XP_074344518
LinkDB
Position
9:complement(1430133..1437743)
AA seq 415 aa
MGSLGAVLKHPDDLYPLLKLKYAAKHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP
QLRDAVCIFYLVLRALDTVEDDTSISAEVKVPILNNFHRHVYDNDWHFSCGTKEYKVLMD
EFHHVSNAFLELAKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL
SKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL
EDLKSEENSAKAVQCLNEMVANALIHAEDCLQYMSDLRDPAIFRFCAIPQIMAIGTLSLC
FNNIQVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCLLKSKVDKDDPNATITLSRL
EAIQKTCKNSGALTKSRRSYIIENESGYNSVLIAIIFIILAILCSYLSSNLSNNA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgggaagcttgggagctgtattgaagcatcctgatgatttgtatccacttttaaagctt
aaatatgctgctaaacacgccgagaaacagatcccaccggagccacactgggcgttctgt
tattctatgcttcataaggtttctagaagcttcggtctcgttattcaacagctcggtcca
cagcttcgtgatgctgtgtgcattttttacttggtacttcgggctctcgacactgttgag
gatgacacaagcatatccgcagaggttaaagtacctatcctgaataattttcatcgccac
gtatatgataatgattggcacttctcatgtggtacgaaggaatacaaagttctcatggac
gagttccatcatgtttctaatgcctttttggagctcgctaaaggttaccaggaggcaata
gaagatatcaccatgcgaatgggtgcaggaatggcaaagtttatatgcaaggaggtagaa
tccattgatgattatgatgaatattgtcactatgtagcaggacttgttggattagggctg
tcaaagctattccatgcttcaggggcagaagatctggctacagatgctttatctaattca
atgggtttatttctccagaagacaaacatcatccgagattatttggaggacattaatgag
ataccaaagtcacgcatgttttggcctcgcgagatctggagtaaatatgttgataaactc
gaggacttaaaatctgaggagaactcagcaaaggcggtgcagtgccttaatgagatggtc
gcaaatgctctgatacacgcagaagactgtctacaatacatgtctgatttgcgggatcct
gccatctttcggttctgtgcaattccacagataatggcaattggaacgctttctttatgc
ttcaacaatattcaagtcttcagaggggttgtgaaaatgagacgtggtctcactgctaaa
gttattgaccgaacaaaaacaatgtccgacgtatatggtgcattctttgatttttcttgt
ttgctgaagtctaaggttgacaaggatgatccaaatgctacgataactttgagcaggtta
gaagcaattcagaaaacatgcaagaattcaggagctctaactaaaagcagaagatcatac
ataatcgagaatgaatcaggatacaactctgtgttgatcgctatcatcttcatcattctg
gctatcctttgttcatatctatcttcaaacctttcaaacaatgcatga

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