Apium graveolens (celery): 141683830
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Entry
141683830 CDS
T11340
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141683830
Enzymes [BR:
agrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141683830
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141683830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_4
zf_RING_Vps8
VPS18_RING_C
zf-RING_Vps41
Prok-RING_4
RING_XB3-XBAT31
RINGv
Motif
Other DBs
NCBI-GeneID:
141683830
NCBI-ProteinID:
XP_074344695
LinkDB
All DBs
Position
9:37176714..37179366
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AA seq
277 aa
AA seq
DB search
MRKLLAITIIYYYICCYSIKPTSAIVQLKSPSTSFLDTPAKFSARINSSGICGALVVADP
LDACSSLVNNAFNFNRNIKFALIVRGNCTFLEKVRIAQLAGFDGAILFDDQAHENLISMI
GNPKGIWIPAVFVSNEAGETLMKHARGEDGECCIISSLTETSWNVLIISFISLLVIVSVL
AVFVSVRVYWRNRNRSRNLVGEKLVELLPCSTFNATHISGYMEKTCAICLQDFKDGDSLK
ILPCQHKFHANCVGSWLTKWSKSCPVCKYDLKTEVAY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattgttggcaattacaataatttactattacatatgctgctattctatcaaa
cccacctctgcaattgttcagcttaaatcgccatccacttctttcttagatactccagct
aaattcagtgcaagaatcaacagctctggaatatgtggggctttagttgtagctgaccca
ttagatgcttgttcttcacttgttaataacgcctttaattttaatcgtaatattaagttt
gctttgattgttagaggtaattgtacttttctcgaaaaggttcgaattgctcagcttgcg
ggttttgatggggctattttgtttgatgatcaggctcacgagaatttgatttcgatgatt
ggaaaccccaaaggaatatggatacctgctgtttttgtttcaaatgaggctggtgagact
ctaatgaagcatgccagaggggaagacggtgaatgctgcataatctcatctttgacggaa
acatcgtggaatgtgctcataatttcattcatctctttactagtcatagtatctgtcctg
gctgtgtttgtctctgtccgagtttattggagaaatcggaatagatcaaggaatcttgta
ggtgaaaaacttgtggaattacttccatgctcgacattcaatgccactcatataagtgga
tatatggaaaagacttgtgcaatatgtctccaggattttaaagacggggacagtctaaaa
atacttccttgccaacacaaatttcatgctaattgcgtgggctcatggttgactaaatgg
agcaaatcctgtccagtgtgcaagtatgatttgaagactgaagttgcatactag
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