Apium graveolens (celery): 141684226
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Entry
141684226 CDS
T11340
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141684226
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141684226
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
141684226
NCBI-ProteinID:
XP_074345196
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Position
9
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AA seq
436 aa
AA seq
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MTMSVPVKSICFTLLLLLFVGAYAATHQRSHEKEDVQSSTNSTMAERVKDVKGHAVADPD
EIAAMVDMSIHNSTERRKLGFFSCGTGNPIDDCWRCDPNWQRNRKRLADCGIGFGRNAIG
GRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMNSFKTID
GRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAISI
FGSSHIWVDHNSLSNCADGLVDAVMGSTAITVSNNFFTHHNEVMLLGHSDTYMRDKQMQV
TIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPVNPF
AKEVTKRVDTDAGQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSSSMVGT
ITSAAGVLGCRRGRQC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtcggttcctgtaaaatcgatttgtttcactttgctactacttctcttcgtc
ggcgcctacgccgctactcaccaaaggagtcatgaaaaggaggatgtgcagagctcaacc
aactcaacaatggcggagagggtgaaagatgttaaaggtcatgcagttgctgacccagat
gagattgctgcaatggttgacatgagcatacataacagcacagaaaggaggaaactggga
tttttctcctgtggaaccgggaatcccattgatgattgctggcgttgtgaccctaactgg
caacgcaatcgtaagcgccttgctgattgcggcattggttttggccgaaatgccattgga
ggccgtgatggtcgtttctatgttgtcactgattcgggtgacgatgaccctgtcaacccc
cggcctggcaccctgcgccatgctgttatccaggatgaacctctctggattgttttcaag
cgtgatatggtgataacactaaagcaggagctcataatgaacagctttaagacaattgat
ggtcgtggggtcaatgtccatattgctaatggagcttgcatcaccatccagtttgttaca
aatgtcattgttcatggtttgcatatccatgactgcaagcccactggaaatgctatggtt
aggagctcgccgtcccattttggctggaggacaatggctgatggtgatgctatctccatc
tttggttcaagccacatatgggttgatcataattcactatctaactgtgctgacgggctt
gttgatgctgtcatgggctcaactgccattacagtttctaacaatttcttcacccatcac
aatgaggttatgctgttgggtcacagtgacacctacatgagggacaagcaaatgcaagtg
actattgccttcaaccattttggagagggtcttatccagagaatgccaaggtgcaggcat
gggtatttccatgtggtcaacaatgactacactcactgggagatgtatgcaattggtgga
agtgcaaatcccaccatcaacagccaaggcaacagataccttgctccggtcaatcctttt
gcaaaagaggtgacaaagagagtagatactgatgctggccagtggaaaggttggaattgg
aggtcagagggtgacttgttactaaatggggcctattttacaccatctggagctggagct
tcagccagttatgccagagcttcaagcttgggggcaaagtcttcttccatggtcggaaca
attacttccgcagctggtgttcttggctgccgcaggggaaggcaatgttag
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